Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 28% ± 13% | |
glutamatergic neuron | 7 studies | 32% ± 21% | |
oligodendrocyte precursor cell | 6 studies | 29% ± 13% | |
astrocyte | 6 studies | 32% ± 14% | |
oligodendrocyte | 6 studies | 29% ± 7% | |
interneuron | 5 studies | 42% ± 24% | |
macrophage | 5 studies | 26% ± 5% | |
microglial cell | 5 studies | 29% ± 9% | |
neuron | 4 studies | 33% ± 13% | |
GABAergic neuron | 4 studies | 43% ± 17% | |
granule cell | 3 studies | 21% ± 4% | |
cardiac muscle cell | 3 studies | 22% ± 1% | |
retinal cone cell | 3 studies | 30% ± 15% | |
retinal rod cell | 3 studies | 28% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 2864.96 | 653 / 653 | 100% | 7.68 | 603 / 605 |
prostate | 100% | 2057.18 | 245 / 245 | 100% | 6.43 | 500 / 502 |
esophagus | 100% | 1489.69 | 1441 / 1445 | 99% | 6.46 | 182 / 183 |
brain | 99% | 1474.07 | 2607 / 2642 | 100% | 6.88 | 705 / 705 |
bladder | 100% | 1602.10 | 21 / 21 | 98% | 4.61 | 495 / 504 |
adrenal gland | 100% | 1303.62 | 258 / 258 | 98% | 7.15 | 225 / 230 |
pancreas | 99% | 910.02 | 324 / 328 | 99% | 5.44 | 176 / 178 |
intestine | 100% | 1690.91 | 965 / 966 | 98% | 4.43 | 515 / 527 |
breast | 99% | 1149.27 | 454 / 459 | 99% | 6.13 | 1103 / 1118 |
ovary | 100% | 2756.85 | 180 / 180 | 97% | 4.24 | 416 / 430 |
stomach | 99% | 1178.52 | 355 / 359 | 98% | 5.03 | 279 / 286 |
lung | 98% | 1071.17 | 564 / 578 | 99% | 4.99 | 1141 / 1155 |
kidney | 100% | 1434.39 | 89 / 89 | 96% | 4.75 | 866 / 901 |
uterus | 100% | 2142.21 | 170 / 170 | 93% | 4.09 | 429 / 459 |
skin | 91% | 740.46 | 1646 / 1809 | 91% | 4.61 | 429 / 472 |
liver | 93% | 729.36 | 211 / 226 | 73% | 2.02 | 295 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 4.02 | 29 / 29 |
spleen | 100% | 1834.60 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1077.26 | 1319 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 1615.70 | 839 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 789.34 | 776 / 803 | 0% | 0 | 0 / 0 |
adipose | 97% | 879.02 | 1162 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 3.74 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 64% | 2.30 | 51 / 80 |
peripheral blood | 55% | 543.88 | 510 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF780B |
Protein name | Hypothetical BC331191_1, isoform CRA_c (Zinc finger protein 780B) Zinc finger protein 780B (Zinc finger protein 779) Zinc finger protein 780B |
Synonyms | LOC163131 hCG_43358 ZNF779 |
Description | FUNCTION: May be involved in transcriptional regulation. . |
Accessions | ENST00000221355.10 ENST00000678949.1 ENST00000434248.6 ENST00000628151 M0R0W9 Q9Y6R6 ENST00000630970 ENST00000625684.3 ENST00000627835 ENST00000593605.1 M0R168 C9JTJ1 ENST00000598845.5 |