ZNF678 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte precursor cell	5 studies	25% ± 9%	Explore
GABAergic neuron	5 studies	27% ± 6%	Explore
astrocyte	5 studies	28% ± 12%	Explore
oligodendrocyte	5 studies	24% ± 5%	Explore
glutamatergic neuron	4 studies	29% ± 6%	Explore
interneuron	3 studies	33% ± 15%	Explore
microglial cell	3 studies	22% ± 2%	Explore
endothelial cell of lymphatic vessel	3 studies	19% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	29% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	807.96	245 / 245	100%	5.66	502 / 502
brain	100%	396.00	2641 / 2642	100%	7.00	705 / 705
breast	100%	580.58	459 / 459	100%	7.64	1114 / 1118
lung	100%	623.17	578 / 578	99%	4.51	1149 / 1155
esophagus	100%	419.75	1444 / 1445	99%	5.18	182 / 183
thymus	100%	785.05	653 / 653	99%	4.59	600 / 605
uterus	100%	836.51	170 / 170	99%	4.19	453 / 459
pancreas	100%	506.57	327 / 328	99%	3.10	176 / 178
ovary	100%	651.93	180 / 180	97%	3.42	415 / 430
bladder	100%	590.86	21 / 21	96%	3.52	486 / 504
stomach	100%	400.80	358 / 359	97%	3.64	276 / 286
intestine	100%	529.60	966 / 966	94%	3.15	496 / 527
kidney	100%	380.83	89 / 89	90%	2.61	813 / 901
skin	99%	350.06	1797 / 1809	83%	2.83	391 / 472
adrenal gland	100%	318.86	258 / 258	82%	1.81	189 / 230
liver	98%	234.89	222 / 226	71%	2.01	287 / 406
lymph node	0%	0	0 / 0	100%	2.54	29 / 29
spleen	100%	584.87	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	2.24	1 / 1
blood vessel	100%	468.11	1333 / 1335	0%	0	0 / 0
adipose	100%	527.31	1202 / 1204	0%	0	0 / 0
heart	100%	341.30	858 / 861	0%	0	0 / 0
muscle	99%	268.48	793 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	93%	3.03	42 / 45
eye	0%	0	0 / 0	48%	1.02	38 / 80
peripheral blood	45%	177.40	418 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0