Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 26% ± 8% | |
astrocyte | 8 studies | 26% ± 13% | |
glutamatergic neuron | 6 studies | 33% ± 19% | |
oligodendrocyte precursor cell | 6 studies | 29% ± 13% | |
adipocyte | 5 studies | 20% ± 3% | |
fibroblast | 5 studies | 20% ± 4% | |
macrophage | 5 studies | 21% ± 2% | |
GABAergic neuron | 5 studies | 36% ± 17% | |
cardiac muscle cell | 4 studies | 30% ± 3% | |
endothelial cell of lymphatic vessel | 4 studies | 26% ± 5% | |
type I pneumocyte | 4 studies | 19% ± 6% | |
interneuron | 4 studies | 42% ± 22% | |
oligodendrocyte | 4 studies | 25% ± 6% | |
epithelial cell | 3 studies | 29% ± 12% | |
ciliated cell | 3 studies | 23% ± 4% | |
lymphocyte | 3 studies | 20% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 27% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 458.74 | 1445 / 1445 | 100% | 8.12 | 183 / 183 |
prostate | 100% | 823.62 | 245 / 245 | 100% | 8.76 | 501 / 502 |
breast | 100% | 555.83 | 459 / 459 | 100% | 12.66 | 1113 / 1118 |
thymus | 100% | 605.11 | 653 / 653 | 99% | 6.28 | 597 / 605 |
lung | 100% | 543.77 | 577 / 578 | 98% | 6.60 | 1134 / 1155 |
bladder | 100% | 590.10 | 21 / 21 | 98% | 6.92 | 492 / 504 |
ovary | 100% | 710.42 | 180 / 180 | 96% | 6.87 | 411 / 430 |
intestine | 100% | 523.01 | 966 / 966 | 95% | 5.80 | 502 / 527 |
stomach | 100% | 456.32 | 359 / 359 | 95% | 6.15 | 272 / 286 |
pancreas | 97% | 210.88 | 318 / 328 | 97% | 6.02 | 172 / 178 |
kidney | 100% | 415.13 | 89 / 89 | 92% | 4.95 | 827 / 901 |
skin | 100% | 590.12 | 1809 / 1809 | 89% | 4.33 | 418 / 472 |
brain | 89% | 176.88 | 2359 / 2642 | 93% | 4.31 | 657 / 705 |
uterus | 100% | 529.97 | 170 / 170 | 82% | 5.23 | 376 / 459 |
adrenal gland | 100% | 341.25 | 258 / 258 | 81% | 2.98 | 187 / 230 |
liver | 99% | 218.54 | 223 / 226 | 43% | 1.59 | 173 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.18 | 29 / 29 |
muscle | 100% | 518.42 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 911.16 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.61 | 1 / 1 |
adipose | 100% | 441.47 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 357.87 | 1333 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 1069.03 | 927 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 323.16 | 839 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 4.44 | 41 / 45 |
eye | 0% | 0 | 0 / 0 | 73% | 2.56 | 58 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF586 |
Protein name | Zinc finger protein 586 ZNF586 protein |
Synonyms | |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | M0R336 M0R166 Q8N6X9 ENST00000599802.1 ENST00000598885.5 ENST00000651718.1 Q9NXT0 ENST00000396154.7 [Q9NXT0-1] ENST00000598183.1 A0A494BZW3 ENST00000396150.4 [Q9NXT0-2] ENST00000391702.3 [Q9NXT0-3] M0QZ99 |