I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 34% ± 9% | |
| GABAergic neuron | 3 studies | 33% ± 3% | |
| astrocyte | 3 studies | 28% ± 8% | |
| oligodendrocyte | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 34% ± 9% | |
| GABAergic neuron | 3 studies | 33% ± 3% | |
| astrocyte | 3 studies | 28% ± 8% | |
| oligodendrocyte | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 29% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 548.61 | 2641 / 2642 | 100% | 8.35 | 705 / 705 |
| breast | 100% | 321.93 | 459 / 459 | 99% | 6.62 | 1110 / 1118 |
| prostate | 100% | 312.35 | 244 / 245 | 100% | 4.27 | 500 / 502 |
| thymus | 100% | 445.59 | 653 / 653 | 99% | 5.98 | 600 / 605 |
| adrenal gland | 100% | 436.82 | 258 / 258 | 99% | 6.71 | 227 / 230 |
| ovary | 100% | 428.83 | 180 / 180 | 97% | 4.06 | 417 / 430 |
| kidney | 100% | 307.61 | 89 / 89 | 94% | 4.23 | 851 / 901 |
| skin | 100% | 264.44 | 1800 / 1809 | 89% | 3.88 | 418 / 472 |
| lung | 99% | 265.92 | 573 / 578 | 87% | 3.18 | 1010 / 1155 |
| liver | 100% | 162.90 | 226 / 226 | 80% | 2.31 | 326 / 406 |
| pancreas | 89% | 118.84 | 292 / 328 | 88% | 2.63 | 157 / 178 |
| bladder | 100% | 372.00 | 21 / 21 | 75% | 2.34 | 376 / 504 |
| uterus | 100% | 419.41 | 170 / 170 | 70% | 3.79 | 323 / 459 |
| stomach | 98% | 223.09 | 353 / 359 | 63% | 1.56 | 180 / 286 |
| esophagus | 99% | 282.60 | 1430 / 1445 | 52% | 1.52 | 96 / 183 |
| intestine | 99% | 310.24 | 955 / 966 | 45% | 0.95 | 237 / 527 |
| spleen | 100% | 279.69 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 1.18 | 1 / 1 |
| blood vessel | 100% | 371.39 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 100% | 333.33 | 1202 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 100% | 267.71 | 801 / 803 | 0% | 0 | 0 / 0 |
| heart | 97% | 245.81 | 834 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 3.43 | 28 / 29 |
| tonsil | 0% | 0 | 0 / 0 | 71% | 1.99 | 32 / 45 |
| eye | 0% | 0 | 0 / 0 | 56% | 1.43 | 45 / 80 |
| peripheral blood | 41% | 135.98 | 381 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZNF569 |
| Protein name | Zinc finger protein 569 |
| Synonyms | hCG_42406 |
| Description | FUNCTION: May be involved in transcriptional regulation. . FUNCTION: May be involved in transcriptional regulation. . |
| Accessions | K7ENQ2 K7ELU1 ENST00000448051.7 ENST00000591710.5 ENST00000392150.2 [Q5MCW4-2] K7EKE0 ENST00000592490.5 K7EJ12 Q5MCW4 ENST00000392149.6 [Q5MCW4-1] ENST00000316950.11 [Q5MCW4-1] ENST00000589833.5 |
