Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 5 studies | 21% ± 5% | |
astrocyte | 4 studies | 22% ± 5% | |
glutamatergic neuron | 4 studies | 39% ± 13% | |
oligodendrocyte precursor cell | 4 studies | 30% ± 9% | |
microglial cell | 3 studies | 17% ± 1% | |
mast cell | 3 studies | 18% ± 2% | |
GABAergic neuron | 3 studies | 31% ± 16% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 27% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 972.06 | 180 / 180 | 99% | 6.79 | 425 / 430 |
thymus | 100% | 998.21 | 653 / 653 | 99% | 6.66 | 597 / 605 |
brain | 99% | 591.04 | 2603 / 2642 | 99% | 9.10 | 699 / 705 |
kidney | 100% | 674.15 | 89 / 89 | 92% | 4.20 | 826 / 901 |
breast | 97% | 539.74 | 446 / 459 | 94% | 6.22 | 1048 / 1118 |
prostate | 100% | 823.77 | 245 / 245 | 90% | 3.63 | 451 / 502 |
pancreas | 97% | 288.35 | 319 / 328 | 92% | 3.95 | 164 / 178 |
bladder | 100% | 694.95 | 21 / 21 | 83% | 5.56 | 417 / 504 |
skin | 99% | 590.10 | 1787 / 1809 | 83% | 4.84 | 393 / 472 |
lung | 100% | 673.40 | 576 / 578 | 82% | 2.90 | 950 / 1155 |
adrenal gland | 100% | 415.04 | 257 / 258 | 72% | 2.93 | 166 / 230 |
stomach | 98% | 384.91 | 353 / 359 | 71% | 2.26 | 202 / 286 |
intestine | 100% | 660.45 | 966 / 966 | 64% | 1.91 | 336 / 527 |
esophagus | 99% | 503.64 | 1432 / 1445 | 57% | 1.83 | 104 / 183 |
uterus | 100% | 636.02 | 170 / 170 | 52% | 2.44 | 240 / 459 |
lymph node | 0% | 0 | 0 / 0 | 100% | 5.56 | 29 / 29 |
spleen | 100% | 1162.90 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.25 | 1 / 1 |
blood vessel | 100% | 590.59 | 1332 / 1335 | 0% | 0 | 0 / 0 |
adipose | 95% | 311.67 | 1145 / 1204 | 0% | 0 | 0 / 0 |
heart | 93% | 278.31 | 799 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 53% | 1.58 | 42 / 80 |
peripheral blood | 45% | 193.60 | 417 / 929 | 0% | 0 | 0 / 0 |
liver | 20% | 34.58 | 45 / 226 | 21% | 0.73 | 86 / 406 |
tonsil | 0% | 0 | 0 / 0 | 29% | 0.44 | 13 / 45 |
muscle | 6% | 8.51 | 45 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF439 |
Protein name | Zinc finger protein 439 |
Synonyms | hCG_2036823 |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000455282.1 ENST00000682736.1 C9JMA7 Q8NDP4 A0A0C4DG37 ENST00000304030.2 A0A804HI69 ENST00000442091.5 |