Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 10 studies | 33% ± 12% | |
| oligodendrocyte precursor cell | 6 studies | 24% ± 10% | |
| endothelial cell | 5 studies | 22% ± 6% | |
| epithelial cell | 5 studies | 24% ± 5% | |
| GABAergic neuron | 5 studies | 30% ± 7% | |
| astrocyte | 5 studies | 29% ± 7% | |
| neuron | 4 studies | 27% ± 11% | |
| glutamatergic neuron | 4 studies | 39% ± 7% | |
| interneuron | 4 studies | 31% ± 13% | |
| microglial cell | 3 studies | 24% ± 4% | |
| fibroblast | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2088.15 | 1445 / 1445 | 100% | 8.37 | 183 / 183 |
| breast | 100% | 2457.78 | 459 / 459 | 100% | 16.47 | 1117 / 1118 |
| brain | 100% | 1765.73 | 2638 / 2642 | 100% | 16.19 | 705 / 705 |
| thymus | 100% | 2810.28 | 653 / 653 | 100% | 13.20 | 604 / 605 |
| prostate | 100% | 2429.31 | 245 / 245 | 100% | 13.24 | 501 / 502 |
| lung | 100% | 2060.64 | 578 / 578 | 100% | 10.56 | 1150 / 1155 |
| adrenal gland | 100% | 2216.22 | 258 / 258 | 100% | 10.86 | 229 / 230 |
| uterus | 100% | 2701.02 | 170 / 170 | 99% | 10.31 | 456 / 459 |
| pancreas | 100% | 1384.58 | 327 / 328 | 99% | 8.49 | 177 / 178 |
| bladder | 100% | 2269.62 | 21 / 21 | 99% | 9.50 | 499 / 504 |
| kidney | 100% | 1677.39 | 89 / 89 | 99% | 10.30 | 891 / 901 |
| intestine | 100% | 2460.65 | 966 / 966 | 99% | 7.10 | 521 / 527 |
| stomach | 100% | 1832.88 | 359 / 359 | 98% | 7.21 | 281 / 286 |
| ovary | 100% | 2928.75 | 180 / 180 | 98% | 7.41 | 422 / 430 |
| liver | 100% | 1102.98 | 226 / 226 | 96% | 5.47 | 390 / 406 |
| skin | 100% | 1812.26 | 1809 / 1809 | 95% | 10.12 | 450 / 472 |
| adipose | 100% | 2130.21 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 2257.76 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 11.53 | 29 / 29 |
| spleen | 100% | 2614.34 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 4.73 | 1 / 1 |
| muscle | 100% | 1147.84 | 800 / 803 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 9.16 | 44 / 45 |
| heart | 98% | 1241.68 | 841 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 91% | 8.51 | 73 / 80 |
| peripheral blood | 85% | 1216.59 | 787 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005829 | Cellular component | cytosol |
| GO_0015630 | Cellular component | microtubule cytoskeleton |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0005515 | Molecular function | protein binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZNF397 |
| Protein name | Zinc finger protein 397 (Zinc finger and SCAN domain-containing protein 15) (Zinc finger protein 47) Zinc finger protein 397 (cDNA FLJ14478 fis, clone MAMMA1001633, moderately similar to ZINC FINGER PROTEIN 165) Zinc finger protein 397 |
| Synonyms | ZNF47 hCG_1811252 ZSCAN15 |
| Description | FUNCTION: Isoform 3 acts as a DNA-dependent transcriptional repressor. . |
| Accessions | K7ERU5 Q96K65 ENST00000330501.12 [Q8NF99-1] ENST00000261333.10 [Q8NF99-2] ENST00000588119.1 M0R288 ENST00000355632.8 ENST00000591206.5 [Q8NF99-3] ENST00000601719.1 Q8NF99 ENST00000585800.1 [Q8NF99-3] K7EIM5 ENST00000592264.1 |
