Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 21% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 25% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2908.21 | 1445 / 1445 | 100% | 22.45 | 183 / 183 |
prostate | 100% | 3994.77 | 245 / 245 | 100% | 14.48 | 502 / 502 |
thymus | 100% | 4494.25 | 653 / 653 | 100% | 15.58 | 605 / 605 |
uterus | 100% | 3943.82 | 170 / 170 | 100% | 15.04 | 459 / 459 |
skin | 100% | 3505.24 | 1809 / 1809 | 100% | 15.52 | 471 / 472 |
lung | 100% | 3165.59 | 578 / 578 | 100% | 14.59 | 1150 / 1155 |
breast | 100% | 3283.96 | 459 / 459 | 100% | 15.12 | 1113 / 1118 |
ovary | 100% | 3997.05 | 180 / 180 | 100% | 14.02 | 428 / 430 |
pancreas | 100% | 1998.85 | 328 / 328 | 99% | 12.76 | 177 / 178 |
intestine | 100% | 3229.40 | 966 / 966 | 99% | 14.71 | 524 / 527 |
bladder | 100% | 2893.10 | 21 / 21 | 99% | 14.80 | 501 / 504 |
stomach | 100% | 2626.84 | 359 / 359 | 99% | 16.51 | 284 / 286 |
kidney | 100% | 2432.94 | 89 / 89 | 98% | 9.82 | 886 / 901 |
adrenal gland | 100% | 2640.66 | 258 / 258 | 98% | 11.90 | 226 / 230 |
brain | 98% | 2442.71 | 2597 / 2642 | 100% | 12.47 | 704 / 705 |
liver | 100% | 1457.61 | 226 / 226 | 97% | 8.41 | 393 / 406 |
adipose | 100% | 2846.96 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 12.46 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.15 | 29 / 29 |
spleen | 100% | 5069.80 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.74 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.42 | 1 / 1 |
blood vessel | 100% | 2917.80 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1932.74 | 802 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 3031.85 | 916 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 1332.49 | 847 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048812 | Biological process | neuron projection morphogenesis |
GO_0007420 | Biological process | brain development |
GO_0002052 | Biological process | positive regulation of neuroblast proliferation |
GO_0048854 | Biological process | brain morphogenesis |
GO_0050769 | Biological process | positive regulation of neurogenesis |
GO_0040029 | Biological process | epigenetic regulation of gene expression |
GO_0050671 | Biological process | positive regulation of lymphocyte proliferation |
GO_0001701 | Biological process | in utero embryonic development |
GO_0021895 | Biological process | cerebral cortex neuron differentiation |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0035097 | Cellular component | histone methyltransferase complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_1990226 | Molecular function | histone methyltransferase binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
Gene name | ZNF335 |
Protein name | Zinc finger protein 335 (NRC-interacting factor 1) (NIF-1) ZNF335 protein |
Synonyms | |
Description | FUNCTION: Component or associated component of some histone methyltransferase complexes may regulate transcription through recruitment of those complexes on gene promoters . Enhances ligand-dependent transcriptional activation by nuclear hormone receptors . Plays an important role in neural progenitor cell proliferation and self-renewal through the regulation of specific genes involved brain development, including REST . Also controls the expression of genes involved in somatic development and regulates, for instance, lymphoblast proliferation . . |
Accessions | Q9H4Z2 Q8IW09 ENST00000322927.3 [Q9H4Z2-1] |