I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 23% ± 5% | |
| endothelial cell | 3 studies | 21% ± 5% | |
| glutamatergic neuron | 3 studies | 25% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 23% ± 5% | |
| endothelial cell | 3 studies | 21% ± 5% | |
| glutamatergic neuron | 3 studies | 25% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 1153.11 | 459 / 459 | 100% | 16.13 | 1118 / 1118 |
| esophagus | 100% | 1008.06 | 1445 / 1445 | 100% | 13.95 | 183 / 183 |
| lung | 100% | 1145.35 | 578 / 578 | 100% | 13.80 | 1155 / 1155 |
| ovary | 100% | 1196.42 | 180 / 180 | 100% | 11.00 | 430 / 430 |
| stomach | 100% | 737.70 | 359 / 359 | 100% | 12.68 | 286 / 286 |
| intestine | 100% | 1084.53 | 966 / 966 | 100% | 12.40 | 526 / 527 |
| bladder | 100% | 1111.10 | 21 / 21 | 100% | 11.77 | 503 / 504 |
| prostate | 100% | 940.85 | 245 / 245 | 100% | 11.37 | 501 / 502 |
| uterus | 100% | 1235.70 | 170 / 170 | 100% | 13.40 | 458 / 459 |
| brain | 100% | 711.76 | 2633 / 2642 | 100% | 13.28 | 705 / 705 |
| thymus | 100% | 786.32 | 652 / 653 | 99% | 10.74 | 600 / 605 |
| liver | 100% | 436.16 | 226 / 226 | 99% | 7.65 | 400 / 406 |
| kidney | 100% | 663.31 | 89 / 89 | 98% | 10.67 | 887 / 901 |
| adrenal gland | 100% | 688.61 | 258 / 258 | 98% | 6.80 | 226 / 230 |
| pancreas | 98% | 456.78 | 322 / 328 | 99% | 11.47 | 177 / 178 |
| skin | 100% | 992.32 | 1808 / 1809 | 97% | 11.25 | 457 / 472 |
| adipose | 100% | 1152.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1234.71 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 13.17 | 29 / 29 |
| muscle | 100% | 1262.69 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1117.47 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 13.29 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 6.47 | 1 / 1 |
| peripheral blood | 99% | 1164.12 | 922 / 929 | 0% | 0 | 0 / 0 |
| heart | 97% | 649.32 | 834 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 90% | 5.77 | 72 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0048661 | Biological process | positive regulation of smooth muscle cell proliferation |
| GO_1905382 | Biological process | positive regulation of snRNA transcription by RNA polymerase II |
| GO_0006359 | Biological process | regulation of transcription by RNA polymerase III |
| GO_0045945 | Biological process | positive regulation of transcription by RNA polymerase III |
| GO_0006355 | Biological process | regulation of DNA-templated transcription |
| GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0003682 | Molecular function | chromatin binding |
| GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZNF143 |
| Protein name | ZNF143 protein Zinc finger protein 143 (SPH-binding factor) (Selenocysteine tRNA gene transcription-activating factor) (hStaf) Zinc finger protein 143 |
| Synonyms | STAF SBF |
| Description | FUNCTION: Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8. . |
| Accessions | ENST00000412390.6 ENST00000534265.5 H7C1P6 C9JTC5 ENST00000533542.5 E7EN86 E9PS81 C9JCG1 C9J2G7 ENST00000526657.5 ENST00000447186.1 E9PPB0 ENST00000396604.5 [P52747-3] E9PLN4 ENST00000531943.5 ENST00000496276.5 ENST00000414370.5 E9PMY8 ENST00000438144.6 ENST00000417726.1 ENST00000530463.5 [P52747-3] E9PJF2 P52747 ENST00000396597.7 [P52747-2] Q9H4D4 ENST00000396602.7 [P52747-1] Q9H176 ENST00000299606.6 E9PLS7 C9JRS3 ENST00000532577.5 |
