Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 22% ± 6% | |
oligodendrocyte | 7 studies | 26% ± 6% | |
glutamatergic neuron | 6 studies | 38% ± 17% | |
astrocyte | 6 studies | 26% ± 9% | |
epithelial cell | 5 studies | 29% ± 7% | |
GABAergic neuron | 5 studies | 32% ± 14% | |
oligodendrocyte precursor cell | 5 studies | 26% ± 7% | |
interneuron | 4 studies | 32% ± 17% | |
microglial cell | 3 studies | 22% ± 0% | |
lymphocyte | 3 studies | 19% ± 2% | |
fibroblast | 3 studies | 20% ± 2% | |
macrophage | 3 studies | 19% ± 2% | |
basal cell | 3 studies | 24% ± 5% | |
adipocyte | 3 studies | 21% ± 4% | |
neuron | 3 studies | 27% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 32% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1342.71 | 459 / 459 | 100% | 15.19 | 1115 / 1118 |
bladder | 100% | 1182.33 | 21 / 21 | 100% | 11.79 | 502 / 504 |
prostate | 100% | 1236.01 | 245 / 245 | 100% | 13.47 | 500 / 502 |
lung | 100% | 1119.62 | 577 / 578 | 100% | 11.76 | 1152 / 1155 |
thymus | 100% | 1442.31 | 653 / 653 | 100% | 17.62 | 602 / 605 |
esophagus | 100% | 1049.04 | 1445 / 1445 | 99% | 13.01 | 182 / 183 |
pancreas | 100% | 505.14 | 328 / 328 | 99% | 13.41 | 177 / 178 |
stomach | 100% | 744.55 | 359 / 359 | 99% | 11.65 | 283 / 286 |
uterus | 100% | 1242.46 | 170 / 170 | 99% | 11.60 | 454 / 459 |
brain | 99% | 602.10 | 2610 / 2642 | 100% | 10.82 | 705 / 705 |
adrenal gland | 100% | 1119.72 | 258 / 258 | 99% | 10.68 | 227 / 230 |
intestine | 100% | 1133.56 | 966 / 966 | 98% | 12.05 | 519 / 527 |
ovary | 100% | 1305.35 | 180 / 180 | 98% | 7.53 | 423 / 430 |
kidney | 100% | 876.25 | 89 / 89 | 98% | 10.24 | 883 / 901 |
skin | 100% | 1019.11 | 1808 / 1809 | 95% | 13.18 | 449 / 472 |
liver | 100% | 541.90 | 226 / 226 | 91% | 5.71 | 370 / 406 |
adipose | 100% | 1269.35 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1131.19 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.39 | 29 / 29 |
spleen | 100% | 1066.18 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.24 | 1 / 1 |
muscle | 100% | 622.79 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 600.35 | 835 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 638.27 | 822 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 70% | 5.39 | 56 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0008270 | Molecular function | zinc ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ZMYM5 |
Protein name | Zinc finger MYM-type protein 5 (Zinc finger protein 198-like 1) (Zinc finger protein 237) |
Synonyms | ZNF198L1 ZNF237 HSPC050 |
Description | FUNCTION: Functions as a transcriptional regulator. . |
Accessions | ENST00000382905.8 [Q9UJ78-1] ENST00000337963.9 [Q9UJ78-4] Q9UJ78 ENST00000382907.8 [Q9UJ78-2] |