Insufficient scRNA-seq data for expression of ZIC5 at single-cell level.
Insufficient scRNA-seq data for expression of ZIC5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 93% | 1253.37 | 2470 / 2642 | 81% | 3.38 | 568 / 705 |
tonsil | 0% | 0 | 0 / 0 | 82% | 4.24 | 37 / 45 |
esophagus | 0% | 0.11 | 1 / 1445 | 67% | 3.59 | 122 / 183 |
uterus | 0% | 0 | 0 / 170 | 62% | 3.98 | 285 / 459 |
lung | 0% | 0.60 | 2 / 578 | 43% | 2.13 | 502 / 1155 |
prostate | 0% | 0.26 | 1 / 245 | 39% | 1.39 | 194 / 502 |
intestine | 0% | 0 | 0 / 966 | 38% | 2.20 | 200 / 527 |
liver | 0% | 0 | 0 / 226 | 37% | 1.53 | 149 / 406 |
stomach | 0% | 0 | 0 / 359 | 31% | 1.75 | 89 / 286 |
bladder | 0% | 0 | 0 / 21 | 23% | 1.31 | 117 / 504 |
ovary | 1% | 1.69 | 2 / 180 | 20% | 1.64 | 86 / 430 |
pancreas | 0% | 0 | 0 / 328 | 13% | 0.28 | 24 / 178 |
breast | 0% | 0.16 | 1 / 459 | 10% | 0.42 | 115 / 1118 |
skin | 0% | 0 | 0 / 1809 | 6% | 0.20 | 26 / 472 |
kidney | 0% | 0 | 0 / 89 | 4% | 0.22 | 35 / 901 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
adrenal gland | 1% | 7.54 | 2 / 258 | 3% | 0.05 | 6 / 230 |
eye | 0% | 0 | 0 / 0 | 1% | 0.03 | 1 / 80 |
thymus | 0% | 0.09 | 1 / 653 | 1% | 0.04 | 4 / 605 |
blood vessel | 0% | 0.18 | 2 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007417 | Biological process | central nervous system development |
GO_0030154 | Biological process | cell differentiation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZIC5 |
Protein name | Zinc finger protein ZIC 5 (Zinc finger protein of the cerebellum 5) |
Synonyms | |
Description | FUNCTION: Essential for neural crest development, converting cells from an epidermal fate to a neural crest cell fate. Binds to DNA (By similarity). . |
Accessions | ENST00000267294.5 Q96T25 |