Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 4 studies | 24% ± 5% | |
glutamatergic neuron | 4 studies | 31% ± 14% | |
GABAergic neuron | 3 studies | 28% ± 10% | |
oligodendrocyte | 3 studies | 20% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 27% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2227.47 | 1445 / 1445 | 100% | 16.42 | 183 / 183 |
prostate | 100% | 1814.10 | 245 / 245 | 100% | 17.16 | 502 / 502 |
skin | 100% | 2526.73 | 1808 / 1809 | 100% | 32.71 | 472 / 472 |
thymus | 100% | 2528.64 | 653 / 653 | 100% | 25.10 | 604 / 605 |
brain | 100% | 1511.86 | 2637 / 2642 | 100% | 26.65 | 705 / 705 |
kidney | 100% | 1923.51 | 89 / 89 | 100% | 20.30 | 897 / 901 |
breast | 100% | 2190.29 | 459 / 459 | 100% | 23.05 | 1113 / 1118 |
uterus | 100% | 1934.75 | 170 / 170 | 99% | 15.96 | 455 / 459 |
lung | 100% | 1843.14 | 578 / 578 | 99% | 15.13 | 1143 / 1155 |
stomach | 100% | 1340.36 | 359 / 359 | 99% | 10.99 | 282 / 286 |
bladder | 100% | 2016.10 | 21 / 21 | 98% | 13.53 | 496 / 504 |
adrenal gland | 100% | 2841.32 | 258 / 258 | 98% | 20.72 | 226 / 230 |
liver | 100% | 1256.35 | 226 / 226 | 97% | 11.34 | 394 / 406 |
ovary | 100% | 1572.90 | 180 / 180 | 97% | 12.63 | 417 / 430 |
intestine | 100% | 2030.94 | 966 / 966 | 97% | 10.68 | 511 / 527 |
pancreas | 97% | 739.27 | 318 / 328 | 99% | 17.02 | 176 / 178 |
adipose | 100% | 2288.90 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2229.56 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 32.28 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.74 | 29 / 29 |
muscle | 100% | 1963.37 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1800.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.54 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.22 | 1 / 1 |
peripheral blood | 98% | 1382.22 | 914 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 1150.19 | 846 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0044829 | Biological process | positive regulation by host of viral genome replication |
GO_0140042 | Biological process | lipid droplet formation |
GO_0016236 | Biological process | macroautophagy |
GO_0009267 | Biological process | cellular response to starvation |
GO_0005795 | Cellular component | Golgi stack |
GO_0097629 | Cellular component | extrinsic component of omegasome membrane |
GO_0005811 | Cellular component | lipid droplet |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_1990462 | Cellular component | omegasome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0044233 | Cellular component | mitochondria-associated endoplasmic reticulum membrane contact site |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0000407 | Cellular component | phagophore assembly site |
GO_0005776 | Cellular component | autophagosome |
GO_0005547 | Molecular function | phosphatidylinositol-3,4,5-trisphosphate binding |
GO_0032266 | Molecular function | phosphatidylinositol-3-phosphate binding |
GO_0005545 | Molecular function | 1-phosphatidylinositol binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0043325 | Molecular function | phosphatidylinositol-3,4-bisphosphate binding |
Gene name | ZFYVE1 |
Protein name | Zinc finger FYVE domain-containing protein 1 (Double FYVE-containing protein 1) (SR3) (Tandem FYVE fingers-1) Zinc finger FYVE-type containing 1 |
Synonyms | PP10436 ZNFN2A1 DFCP1 TAFF1 KIAA1589 |
Description | FUNCTION: Plays a role in the formation of lipid droplets (LDs) which are storage organelles at the center of lipid and energy homeostasis . Regulates the morphology, size and distribution of LDs . Mediates the formation of endoplasmic reticulum-lipid droplets (ER-LD) contacts by forming a complex with RAB18 and ZW10 . Binds to phosphatidylinositol 3-phosphate (PtdIns3P) through FYVE-type zinc finger . .; FUNCTION: (Microbial infection) Upon SARS coronavirus-2/SARS-CoV-2 infection, mediates through binding with non-structural protein 6 (nsp6) the replication organelle-lipid droplet association required to sustain viral replication. . |
Accessions | ENST00000553891.5 G3V5N8 ENST00000556143.6 [Q9HBF4-1] ENST00000555072.1 [Q9HBF4-2] ENST00000394207.6 [Q9HBF4-2] Q9HBF4 ENST00000318876.9 [Q9HBF4-3] |