Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 15 studies | 42% ± 19% | |
astrocyte | 13 studies | 53% ± 21% | |
oligodendrocyte | 13 studies | 40% ± 16% | |
retinal ganglion cell | 6 studies | 50% ± 15% | |
fibroblast | 5 studies | 33% ± 21% | |
retinal bipolar neuron | 5 studies | 33% ± 29% | |
mesothelial cell | 4 studies | 32% ± 11% | |
OFF-bipolar cell | 4 studies | 34% ± 12% | |
ON-bipolar cell | 4 studies | 35% ± 22% | |
adipocyte | 4 studies | 34% ± 17% | |
neuron | 4 studies | 37% ± 17% | |
abnormal cell | 3 studies | 29% ± 10% | |
hepatocyte | 3 studies | 37% ± 12% | |
ependymal cell | 3 studies | 42% ± 14% | |
GABAergic neuron | 3 studies | 47% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2510.38 | 258 / 258 | 95% | 8.42 | 219 / 230 |
brain | 90% | 1111.88 | 2369 / 2642 | 98% | 9.18 | 693 / 705 |
breast | 100% | 1635.25 | 458 / 459 | 79% | 3.56 | 884 / 1118 |
liver | 100% | 997.74 | 225 / 226 | 67% | 1.80 | 270 / 406 |
prostate | 78% | 585.48 | 192 / 245 | 58% | 1.42 | 291 / 502 |
bladder | 100% | 1983.29 | 21 / 21 | 30% | 1.06 | 152 / 504 |
ovary | 87% | 529.86 | 157 / 180 | 35% | 1.00 | 149 / 430 |
esophagus | 64% | 828.72 | 924 / 1445 | 51% | 2.08 | 94 / 183 |
uterus | 81% | 725.25 | 137 / 170 | 34% | 2.77 | 154 / 459 |
skin | 52% | 1156.62 | 946 / 1809 | 49% | 2.13 | 230 / 472 |
adipose | 99% | 1867.35 | 1195 / 1204 | 0% | 0 | 0 / 0 |
muscle | 98% | 1145.55 | 786 / 803 | 0% | 0 | 0 / 0 |
intestine | 71% | 1436.37 | 687 / 966 | 20% | 0.55 | 107 / 527 |
blood vessel | 88% | 854.37 | 1172 / 1335 | 0% | 0 | 0 / 0 |
stomach | 51% | 433.89 | 183 / 359 | 36% | 1.28 | 104 / 286 |
pancreas | 3% | 11.34 | 11 / 328 | 67% | 1.79 | 120 / 178 |
thymus | 40% | 148.81 | 259 / 653 | 15% | 0.86 | 92 / 605 |
tonsil | 0% | 0 | 0 / 0 | 40% | 1.75 | 18 / 45 |
kidney | 15% | 61.85 | 13 / 89 | 24% | 1.08 | 217 / 901 |
lung | 3% | 10.49 | 19 / 578 | 32% | 1.27 | 375 / 1155 |
heart | 23% | 87.39 | 195 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 6% | 0.12 | 5 / 80 |
spleen | 6% | 23.76 | 14 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 2.29 | 4 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | ZFHX4 |
Protein name | ZFHX4 protein Zinc finger homeobox protein 4 (Zinc finger homeodomain protein 4) (ZFH-4) Zinc finger homeobox 4 Alternative protein ZFHX4 |
Synonyms | |
Description | FUNCTION: May play a role in neural and muscle differentiation (By similarity). May be involved in transcriptional regulation. . |
Accessions | ENST00000523809.1 H0YBV0 A0A494BZV7 Q86WW5 ENST00000520307.5 ENST00000651372.2 [Q86UP3-5] E5RG79 E7EVZ1 E5RHS1 Q5U3C1 H0YC81 ENST00000523885.2 ENST00000518282.5 E5RI93 ENST00000519536.1 E5RGK3 ENST00000517585.1 Q86UP3 ENST00000651020.1 L8E970 ENST00000523625.5 Q6DK57 |