Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 30% ± 12% | |
podocyte | 4 studies | 64% ± 17% | |
natural killer cell | 4 studies | 18% ± 4% | |
endothelial cell | 3 studies | 22% ± 4% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 17% ± 1% | |
GABAergic neuron | 3 studies | 22% ± 1% | |
glutamatergic neuron | 3 studies | 28% ± 4% | |
dendritic cell | 3 studies | 21% ± 2% | |
transit amplifying cell | 3 studies | 23% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 21% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2231.90 | 21 / 21 | 100% | 38.07 | 504 / 504 |
breast | 100% | 2552.15 | 459 / 459 | 100% | 42.39 | 1118 / 1118 |
esophagus | 100% | 2064.76 | 1445 / 1445 | 100% | 33.34 | 183 / 183 |
intestine | 100% | 2644.34 | 966 / 966 | 100% | 42.49 | 527 / 527 |
lung | 100% | 2362.81 | 578 / 578 | 100% | 33.15 | 1155 / 1155 |
ovary | 100% | 2896.75 | 180 / 180 | 100% | 29.58 | 430 / 430 |
prostate | 100% | 2623.94 | 245 / 245 | 100% | 39.46 | 502 / 502 |
stomach | 100% | 2011.43 | 359 / 359 | 100% | 39.38 | 286 / 286 |
uterus | 100% | 2646.38 | 170 / 170 | 100% | 37.03 | 459 / 459 |
kidney | 100% | 5517.72 | 89 / 89 | 100% | 33.52 | 899 / 901 |
brain | 100% | 1328.34 | 2634 / 2642 | 100% | 27.40 | 705 / 705 |
pancreas | 100% | 1391.97 | 327 / 328 | 100% | 35.91 | 178 / 178 |
thymus | 100% | 2843.55 | 653 / 653 | 100% | 32.44 | 603 / 605 |
liver | 100% | 1398.46 | 226 / 226 | 99% | 22.91 | 401 / 406 |
adrenal gland | 100% | 2118.03 | 258 / 258 | 98% | 23.43 | 226 / 230 |
skin | 100% | 2307.27 | 1809 / 1809 | 97% | 25.65 | 460 / 472 |
adipose | 100% | 2347.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 32.68 | 29 / 29 |
spleen | 100% | 3072.15 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 29.44 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.27 | 1 / 1 |
blood vessel | 100% | 1928.44 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1236.06 | 853 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 960.70 | 792 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 1549.36 | 879 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 17.49 | 74 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018345 | Biological process | protein palmitoylation |
GO_0018230 | Biological process | peptidyl-L-cysteine S-palmitoylation |
GO_0140438 | Biological process | protein stearoylation |
GO_0006612 | Biological process | protein targeting to membrane |
GO_0010636 | Biological process | positive regulation of mitochondrial fusion |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0016409 | Molecular function | palmitoyltransferase activity |
GO_0019706 | Molecular function | protein-cysteine S-palmitoyltransferase activity |
GO_0140439 | Molecular function | protein-cysteine S-stearoyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | ZDHHC6 |
Protein name | protein S-acyltransferase (EC 2.3.1.225) Alternative protein ZDHHC6 Palmitoyltransferase (EC 2.3.1.225) Palmitoyltransferase ZDHHC6 (EC 2.3.1.225) (Stearoyltransferase ZDHHC6) (EC 2.3.1.-) (Transmembrane protein H4) (Zinc finger DHHC domain-containing protein 6) (DHHC-6) (Zinc finger protein 376) |
Synonyms | hCG_40976 ZNF376 |
Description | FUNCTION: Endoplasmic reticulum palmitoyl acyltransferase that mediates palmitoylation of proteins such as AMFR, CALX, ITPR1 and TFRC . Palmitoylates calnexin (CALX), which is required for its association with the ribosome-translocon complex and efficient folding of glycosylated proteins . Mediates palmitoylation of AMFR, promoting AMFR distribution to the peripheral endoplasmic reticulum . Together with SELENOK, palmitoylates ITPR1 in immune cells, leading to regulate ITPR1 stability and function . Stearoyltransferase that mediates stearoylation of TFRC to inhibit TFRC-mediated activation of the JNK pathway and mitochondrial fragmentation . . |
Accessions | ENST00000682616.1 ENST00000683895.1 [Q9H6R6-1] A0A804HJ80 ENST00000626395.2 ENST00000683319.1 ENST00000682731.1 A0A804HKZ7 A0A804HL82 ENST00000684507.1 [Q9H6R6-1] ENST00000681964.1 ENST00000682055.1 ENST00000682195.1 A0A804HJC7 ENST00000369404.3 [Q9H6R6-2] A0A0D9SEX5 A0A804HL63 ENST00000683505.1 A0A804HJK5 Q9H6R6 L8E944 ENST00000684173.1 ENST00000684741.1 ENST00000369405.7 [Q9H6R6-1] ENST00000682267.1 ENST00000682839.1 A0A804HJ40 |