Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal cone cell | 7 studies | 41% ± 12% | |
retinal rod cell | 7 studies | 29% ± 11% | |
microglial cell | 6 studies | 22% ± 6% | |
oligodendrocyte | 6 studies | 26% ± 7% | |
glutamatergic neuron | 5 studies | 38% ± 17% | |
astrocyte | 5 studies | 29% ± 9% | |
endothelial cell | 4 studies | 23% ± 8% | |
epithelial cell | 4 studies | 28% ± 12% | |
ciliated cell | 4 studies | 21% ± 2% | |
B cell | 3 studies | 16% ± 1% | |
granule cell | 3 studies | 26% ± 7% | |
retinal bipolar neuron | 3 studies | 23% ± 6% | |
OFF-bipolar cell | 3 studies | 36% ± 19% | |
rod bipolar cell | 3 studies | 30% ± 11% | |
GABAergic neuron | 3 studies | 36% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2132.56 | 2639 / 2642 | 98% | 27.05 | 694 / 705 |
thymus | 100% | 3218.67 | 653 / 653 | 98% | 60.30 | 591 / 605 |
prostate | 100% | 1572.18 | 244 / 245 | 98% | 24.35 | 491 / 502 |
pancreas | 100% | 2203.76 | 328 / 328 | 97% | 21.77 | 173 / 178 |
lung | 99% | 1634.35 | 575 / 578 | 93% | 22.33 | 1070 / 1155 |
kidney | 100% | 2144.51 | 89 / 89 | 91% | 19.64 | 822 / 901 |
ovary | 100% | 1589.28 | 180 / 180 | 91% | 15.31 | 390 / 430 |
adrenal gland | 100% | 2619.35 | 258 / 258 | 90% | 22.44 | 206 / 230 |
intestine | 100% | 1326.10 | 965 / 966 | 77% | 13.04 | 406 / 527 |
esophagus | 93% | 908.81 | 1347 / 1445 | 80% | 22.84 | 146 / 183 |
bladder | 100% | 1773.24 | 21 / 21 | 72% | 14.08 | 365 / 504 |
stomach | 100% | 1529.70 | 359 / 359 | 72% | 13.44 | 207 / 286 |
breast | 100% | 1324.91 | 459 / 459 | 67% | 9.42 | 748 / 1118 |
uterus | 100% | 1286.72 | 170 / 170 | 60% | 11.24 | 274 / 459 |
skin | 76% | 887.59 | 1377 / 1809 | 54% | 8.63 | 253 / 472 |
liver | 73% | 437.39 | 164 / 226 | 29% | 3.16 | 117 / 406 |
adipose | 100% | 1493.44 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 1644.75 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1297.23 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 1598.51 | 928 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1555.19 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 87% | 912.15 | 752 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 9.88 | 24 / 29 |
tonsil | 0% | 0 | 0 / 0 | 67% | 11.82 | 30 / 45 |
eye | 0% | 0 | 0 / 0 | 60% | 11.64 | 48 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042176 | Biological process | regulation of protein catabolic process |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_1903539 | Biological process | protein localization to postsynaptic membrane |
GO_0022407 | Biological process | regulation of cell-cell adhesion |
GO_0018230 | Biological process | peptidyl-L-cysteine S-palmitoylation |
GO_1903044 | Biological process | protein localization to membrane raft |
GO_0006612 | Biological process | protein targeting to membrane |
GO_0048168 | Biological process | regulation of neuronal synaptic plasticity |
GO_1900273 | Biological process | positive regulation of long-term synaptic potentiation |
GO_0019538 | Biological process | protein metabolic process |
GO_0018345 | Biological process | protein palmitoylation |
GO_0007416 | Biological process | synapse assembly |
GO_1903076 | Biological process | regulation of protein localization to plasma membrane |
GO_1905751 | Biological process | positive regulation of endosome to plasma membrane protein transport |
GO_1904719 | Biological process | positive regulation of AMPA glutamate receptor clustering |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0098837 | Cellular component | postsynaptic recycling endosome |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0014069 | Cellular component | postsynaptic density |
GO_0098944 | Cellular component | postsynaptic recycling endosome membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0019705 | Molecular function | protein-cysteine S-myristoyltransferase activity |
GO_0016409 | Molecular function | palmitoyltransferase activity |
GO_0019706 | Molecular function | protein-cysteine S-palmitoyltransferase activity |
GO_0140439 | Molecular function | protein-cysteine S-stearoyltransferase activity |
Gene name | ZDHHC2 |
Protein name | Zinc finger DHHC-type palmitoyltransferase 2 Palmitoyltransferase ZDHHC2 (EC 2.3.1.225) (Acyltransferase ZDHHC2) (EC 2.3.1.-) (Reduced expression associated with metastasis protein) (Ream) (Reduced expression in cancer protein) (Rec) (Zinc finger DHHC domain-containing protein 2) (DHHC-2) (Zinc finger protein 372) Palmitoyltransferase (EC 2.3.1.225) |
Synonyms | REC ZNF372 REAM |
Description | FUNCTION: Palmitoyltransferase that catalyzes the addition of palmitate onto various protein substrates and is involved in a variety of cellular processes . Has no stringent fatty acid selectivity and in addition to palmitate can also transfer onto target proteins myristate from tetradecanoyl-CoA and stearate from octadecanoyl-CoA (By similarity). In the nervous system, plays a role in long term synaptic potentiation by palmitoylating AKAP5 through which it regulates protein trafficking from the dendritic recycling endosomes to the plasma membrane and controls both structural and functional plasticity at excitatory synapses (By similarity). In dendrites, mediates the palmitoylation of DLG4 when synaptic activity decreases and induces synaptic clustering of DLG4 and associated AMPA-type glutamate receptors (By similarity). Also mediates the de novo and turnover palmitoylation of RGS7BP, a shuttle for Gi/o-specific GTPase-activating proteins/GAPs, promoting its localization to the plasma membrane in response to the activation of G protein-coupled receptors. Through the localization of these GTPase-activating proteins/GAPs, it also probably plays a role in G protein-coupled receptors signaling in neurons (By similarity). Also probably plays a role in cell adhesion by palmitoylating CD9 and CD151 to regulate their expression and function . Palmitoylates the endoplasmic reticulum protein CKAP4 and regulates its localization to the plasma membrane . Could also palmitoylate LCK and regulate its localization to the plasma membrane . .; FUNCTION: (Microbial infection) Promotes Chikungunya virus (CHIKV) replication by mediating viral nsp1 palmitoylation. . |
Accessions | E5RFZ7 ENST00000522184.1 ENST00000262096.13 A0A1Y8EM58 ENST00000523132.1 Q9UIJ5 |