Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 26% ± 8% | |
oligodendrocyte | 9 studies | 34% ± 12% | |
astrocyte | 8 studies | 39% ± 16% | |
GABAergic neuron | 7 studies | 38% ± 20% | |
oligodendrocyte precursor cell | 7 studies | 30% ± 13% | |
adipocyte | 7 studies | 29% ± 10% | |
ciliated cell | 7 studies | 27% ± 10% | |
microglial cell | 6 studies | 21% ± 5% | |
fibroblast | 6 studies | 24% ± 8% | |
glutamatergic neuron | 5 studies | 52% ± 21% | |
epithelial cell | 5 studies | 23% ± 7% | |
endothelial cell of lymphatic vessel | 5 studies | 19% ± 2% | |
pericyte | 5 studies | 20% ± 4% | |
interneuron | 5 studies | 40% ± 24% | |
retinal cone cell | 4 studies | 28% ± 5% | |
T cell | 4 studies | 16% ± 1% | |
neuron | 4 studies | 41% ± 18% | |
plasma cell | 3 studies | 27% ± 9% | |
cardiac muscle cell | 3 studies | 18% ± 3% | |
ependymal cell | 3 studies | 35% ± 12% | |
macrophage | 3 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 753.08 | 245 / 245 | 99% | 5.52 | 498 / 502 |
thymus | 100% | 759.65 | 653 / 653 | 99% | 4.25 | 598 / 605 |
breast | 100% | 492.03 | 458 / 459 | 98% | 5.58 | 1099 / 1118 |
ovary | 100% | 693.03 | 180 / 180 | 97% | 4.05 | 419 / 430 |
lung | 98% | 442.68 | 567 / 578 | 97% | 3.78 | 1120 / 1155 |
kidney | 100% | 531.57 | 89 / 89 | 95% | 3.20 | 855 / 901 |
stomach | 99% | 397.91 | 356 / 359 | 94% | 3.38 | 269 / 286 |
pancreas | 99% | 387.53 | 324 / 328 | 94% | 2.68 | 168 / 178 |
esophagus | 95% | 397.83 | 1370 / 1445 | 98% | 4.22 | 179 / 183 |
skin | 96% | 418.68 | 1731 / 1809 | 96% | 3.99 | 455 / 472 |
brain | 97% | 358.53 | 2553 / 2642 | 95% | 2.55 | 670 / 705 |
bladder | 100% | 623.00 | 21 / 21 | 90% | 2.65 | 452 / 504 |
intestine | 98% | 447.58 | 948 / 966 | 90% | 2.52 | 473 / 527 |
uterus | 100% | 683.31 | 170 / 170 | 86% | 2.55 | 397 / 459 |
liver | 98% | 415.03 | 222 / 226 | 79% | 2.07 | 321 / 406 |
adrenal gland | 100% | 632.63 | 258 / 258 | 77% | 1.88 | 177 / 230 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.81 | 1 / 1 |
spleen | 100% | 444.26 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 454.20 | 1197 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 486.90 | 1326 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 468.31 | 793 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 3.32 | 28 / 29 |
heart | 95% | 374.93 | 817 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 2.67 | 73 / 80 |
tonsil | 0% | 0 | 0 / 0 | 78% | 1.86 | 35 / 45 |
peripheral blood | 75% | 269.73 | 700 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010165 | Biological process | response to X-ray |
GO_0016604 | Cellular component | nuclear body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003674 | Molecular function | molecular_function |
Gene name | XRRA1 |
Protein name | X-ray radiation resistance-associated protein 1 X-ray radiation resistance associated 1 HCG2016935, isoform CRA_b (X-ray radiation resistance associated 1) |
Synonyms | hCG_2016935 |
Description | FUNCTION: May be involved in the response of cells to X-ray radiation. . |
Accessions | E9PMT6 ENST00000340360.10 [Q6P2D8-1] A0A994J5L1 ENST00000684022.1 ENST00000530562.5 ENST00000531449.5 ENST00000527087.5 [Q6P2D8-2] A0A804HIK0 ENST00000525407.5 E9PP69 ENST00000531852.5 E9PL06 Q6P2D8 ENST00000531849.5 H0YD10 ENST00000321448.12 [Q6P2D8-5] E9PJ58 ENST00000528219.5 ENST00000705661.1 E9PIR2 |