Insufficient scRNA-seq data for expression of XRCC2 at single-cell level.
Insufficient scRNA-seq data for expression of XRCC2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 96% | 60.26 | 163 / 170 | 96% | 7.93 | 442 / 459 |
ovary | 94% | 65.97 | 170 / 180 | 92% | 6.51 | 396 / 430 |
esophagus | 90% | 107.59 | 1296 / 1445 | 96% | 9.59 | 175 / 183 |
intestine | 93% | 95.81 | 898 / 966 | 91% | 6.34 | 481 / 527 |
bladder | 95% | 40.62 | 20 / 21 | 89% | 6.16 | 448 / 504 |
breast | 95% | 87.81 | 437 / 459 | 87% | 6.19 | 971 / 1118 |
stomach | 91% | 76.69 | 326 / 359 | 91% | 6.80 | 259 / 286 |
skin | 98% | 256.92 | 1776 / 1809 | 83% | 5.99 | 390 / 472 |
lung | 92% | 77.14 | 529 / 578 | 84% | 6.88 | 966 / 1155 |
brain | 92% | 57.32 | 2435 / 2642 | 49% | 2.84 | 342 / 705 |
prostate | 98% | 76.77 | 239 / 245 | 22% | 0.76 | 112 / 502 |
adrenal gland | 92% | 58.25 | 238 / 258 | 20% | 0.77 | 45 / 230 |
pancreas | 71% | 28.18 | 232 / 328 | 33% | 1.48 | 58 / 178 |
thymus | 88% | 43.53 | 575 / 653 | 15% | 0.84 | 91 / 605 |
kidney | 85% | 41.83 | 76 / 89 | 16% | 0.59 | 143 / 901 |
spleen | 100% | 157.09 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.99 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 93% | 7.90 | 42 / 45 |
adipose | 90% | 51.67 | 1089 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 6.26 | 25 / 29 |
liver | 52% | 27.81 | 118 / 226 | 33% | 1.38 | 133 / 406 |
heart | 72% | 28.86 | 621 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 53% | 18.80 | 709 / 1335 | 0% | 0 | 0 / 0 |
muscle | 51% | 15.73 | 408 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 47% | 372.88 | 440 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 5% | 0.11 | 4 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006281 | Biological process | DNA repair |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0010165 | Biological process | response to X-ray |
GO_0001701 | Biological process | in utero embryonic development |
GO_0010332 | Biological process | response to gamma radiation |
GO_0050769 | Biological process | positive regulation of neurogenesis |
GO_0035264 | Biological process | multicellular organism growth |
GO_0007098 | Biological process | centrosome cycle |
GO_0000724 | Biological process | double-strand break repair via homologous recombination |
GO_0051321 | Biological process | meiotic cell cycle |
GO_0022008 | Biological process | neurogenesis |
GO_0001756 | Biological process | somitogenesis |
GO_2000269 | Biological process | regulation of fibroblast apoptotic process |
GO_0043524 | Biological process | negative regulation of neuron apoptotic process |
GO_0042148 | Biological process | DNA strand invasion |
GO_0005813 | Cellular component | centrosome |
GO_0005657 | Cellular component | replication fork |
GO_0005654 | Cellular component | nucleoplasm |
GO_0033063 | Cellular component | Rad51B-Rad51C-Rad51D-XRCC2 complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0140664 | Molecular function | ATP-dependent DNA damage sensor activity |
GO_0000400 | Molecular function | four-way junction DNA binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | XRCC2 |
Protein name | X-ray repair cross complementing 2 DNA repair protein XRCC2 (X-ray repair cross-complementing protein 2) |
Synonyms | |
Description | FUNCTION: Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions. Part of the RAD51 paralog protein complex BCDX2 which acts in the BRCA1-BRCA2-dependent HR pathway. Upon DNA damage, BCDX2 acts downstream of BRCA2 recruitment and upstream of RAD51 recruitment. BCDX2 binds predominantly to the intersection of the four duplex arms of the Holliday junction and to junction of replication forks. The BCDX2 complex was originally reported to bind single-stranded DNA, single-stranded gaps in duplex DNA and specifically to nicks in duplex DNA. . |
Accessions | O43543 ENST00000359321.2 A0A8V8TMB7 ENST00000698506.1 |