Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 33% ± 18% | |
glutamatergic neuron | 10 studies | 65% ± 22% | |
oligodendrocyte precursor cell | 10 studies | 49% ± 17% | |
GABAergic neuron | 9 studies | 59% ± 23% | |
astrocyte | 9 studies | 34% ± 14% | |
macrophage | 8 studies | 34% ± 12% | |
microglial cell | 8 studies | 37% ± 13% | |
neuron | 7 studies | 37% ± 19% | |
pericyte | 6 studies | 32% ± 19% | |
B cell | 6 studies | 30% ± 7% | |
adipocyte | 6 studies | 23% ± 3% | |
T cell | 6 studies | 22% ± 5% | |
interneuron | 5 studies | 73% ± 15% | |
type I pneumocyte | 5 studies | 33% ± 7% | |
type II pneumocyte | 5 studies | 26% ± 5% | |
smooth muscle cell | 5 studies | 17% ± 1% | |
oligodendrocyte | 5 studies | 29% ± 16% | |
epithelial cell | 4 studies | 40% ± 21% | |
granule cell | 4 studies | 68% ± 14% | |
cardiac muscle cell | 4 studies | 18% ± 4% | |
Mueller cell | 4 studies | 37% ± 16% | |
amacrine cell | 4 studies | 51% ± 11% | |
retina horizontal cell | 4 studies | 47% ± 18% | |
retinal cone cell | 4 studies | 30% ± 10% | |
retinal ganglion cell | 4 studies | 61% ± 15% | |
club cell | 4 studies | 32% ± 7% | |
CD4-positive, alpha-beta T cell | 3 studies | 25% ± 3% | |
mesothelial cell | 3 studies | 29% ± 9% | |
GABAergic amacrine cell | 3 studies | 60% ± 10% | |
OFF-bipolar cell | 3 studies | 51% ± 12% | |
ON-bipolar cell | 3 studies | 51% ± 13% | |
glycinergic amacrine cell | 3 studies | 47% ± 12% | |
retinal rod cell | 3 studies | 31% ± 13% | |
capillary endothelial cell | 3 studies | 32% ± 6% | |
ciliated cell | 3 studies | 24% ± 6% | |
natural killer cell | 3 studies | 25% ± 2% | |
respiratory goblet cell | 3 studies | 42% ± 15% | |
lymphocyte | 3 studies | 38% ± 11% | |
basal cell | 3 studies | 46% ± 21% | |
myeloid cell | 3 studies | 21% ± 6% | |
mucus secreting cell | 3 studies | 41% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 153.00 | 245 / 245 | 86% | 1.71 | 432 / 502 |
thymus | 100% | 158.86 | 653 / 653 | 86% | 2.75 | 518 / 605 |
brain | 96% | 77.51 | 2532 / 2642 | 81% | 1.53 | 569 / 705 |
esophagus | 100% | 114.44 | 1444 / 1445 | 64% | 1.89 | 118 / 183 |
stomach | 100% | 110.98 | 358 / 359 | 49% | 1.51 | 139 / 286 |
adrenal gland | 100% | 128.81 | 258 / 258 | 48% | 0.78 | 111 / 230 |
uterus | 100% | 89.16 | 170 / 170 | 43% | 0.79 | 197 / 459 |
pancreas | 100% | 159.20 | 328 / 328 | 41% | 0.68 | 73 / 178 |
intestine | 100% | 115.78 | 966 / 966 | 41% | 1.04 | 215 / 527 |
bladder | 100% | 104.67 | 21 / 21 | 39% | 0.77 | 196 / 504 |
lung | 100% | 154.72 | 576 / 578 | 32% | 0.69 | 371 / 1155 |
ovary | 53% | 23.47 | 95 / 180 | 73% | 1.98 | 315 / 430 |
kidney | 100% | 99.02 | 89 / 89 | 22% | 0.39 | 202 / 901 |
skin | 86% | 113.77 | 1555 / 1809 | 36% | 0.69 | 172 / 472 |
breast | 98% | 82.04 | 452 / 459 | 19% | 0.32 | 212 / 1118 |
spleen | 100% | 232.84 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 90% | 57.40 | 1204 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 2.80 | 26 / 29 |
adipose | 89% | 54.04 | 1067 / 1204 | 0% | 0 | 0 / 0 |
heart | 88% | 41.48 | 758 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 68% | 100.95 | 628 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 67% | 1.30 | 30 / 45 |
liver | 35% | 12.64 | 79 / 226 | 9% | 0.18 | 36 / 406 |
eye | 0% | 0 | 0 / 0 | 28% | 0.38 | 22 / 80 |
muscle | 24% | 7.35 | 189 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1902742 | Biological process | apoptotic process involved in development |
GO_0043652 | Biological process | engulfment of apoptotic cell |
GO_0070782 | Biological process | phosphatidylserine exposure on apoptotic cell surface |
GO_0005886 | Cellular component | plasma membrane |
Gene name | XKR6 |
Protein name | XK-related protein XK-related protein 6 |
Synonyms | C8orf5 hCG_1991043 XRG6 C8orf21 C8orf7 hCG_1646976 |
Description | |
Accessions | ENST00000529336.1 ENST00000297303.4 ENST00000416569.3 [Q5GH73-1] H7BYF9 ENST00000382461.8 Q96KT3 H0YEU9 Q5GH73 |