Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 25% ± 7% | |
retinal rod cell | 6 studies | 23% ± 6% | |
retinal cone cell | 5 studies | 33% ± 11% | |
fibroblast | 5 studies | 18% ± 3% | |
microglial cell | 4 studies | 21% ± 2% | |
epithelial cell | 4 studies | 35% ± 5% | |
GABAergic neuron | 4 studies | 42% ± 16% | |
macrophage | 4 studies | 22% ± 4% | |
oligodendrocyte | 4 studies | 26% ± 8% | |
ciliated cell | 3 studies | 19% ± 4% | |
glutamatergic neuron | 3 studies | 58% ± 4% | |
basal cell | 3 studies | 26% ± 5% | |
astrocyte | 3 studies | 29% ± 7% | |
neuron | 3 studies | 38% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2272.41 | 1445 / 1445 | 100% | 17.90 | 183 / 183 |
lung | 100% | 2242.44 | 577 / 578 | 100% | 16.40 | 1154 / 1155 |
brain | 100% | 2100.69 | 2638 / 2642 | 100% | 14.60 | 704 / 705 |
breast | 100% | 2174.02 | 459 / 459 | 100% | 18.48 | 1113 / 1118 |
ovary | 100% | 2137.51 | 180 / 180 | 99% | 10.06 | 426 / 430 |
thymus | 100% | 1787.36 | 653 / 653 | 99% | 13.81 | 599 / 605 |
kidney | 100% | 1975.90 | 89 / 89 | 99% | 15.94 | 891 / 901 |
uterus | 100% | 2214.21 | 170 / 170 | 99% | 13.74 | 453 / 459 |
stomach | 100% | 1468.81 | 359 / 359 | 99% | 14.11 | 282 / 286 |
intestine | 100% | 2038.49 | 966 / 966 | 98% | 12.11 | 519 / 527 |
adrenal gland | 100% | 2341.69 | 258 / 258 | 98% | 14.28 | 226 / 230 |
bladder | 100% | 2443.81 | 21 / 21 | 98% | 12.39 | 495 / 504 |
prostate | 100% | 2000.22 | 245 / 245 | 98% | 12.71 | 493 / 502 |
pancreas | 99% | 798.26 | 324 / 328 | 98% | 12.34 | 175 / 178 |
skin | 100% | 2159.33 | 1808 / 1809 | 96% | 15.05 | 453 / 472 |
liver | 100% | 1493.91 | 226 / 226 | 91% | 8.85 | 369 / 406 |
adipose | 100% | 2497.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2453.20 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3165.63 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1291.63 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.02 | 1 / 1 |
heart | 98% | 2195.00 | 841 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 8.07 | 26 / 29 |
peripheral blood | 88% | 1022.44 | 821 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 5.79 | 58 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006623 | Biological process | protein targeting to vacuole |
GO_0016236 | Biological process | macroautophagy |
GO_0039702 | Biological process | viral budding via host ESCRT complex |
GO_0006612 | Biological process | protein targeting to membrane |
GO_0036258 | Biological process | multivesicular body assembly |
GO_0043162 | Biological process | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
GO_0043328 | Biological process | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
GO_0090148 | Biological process | membrane fission |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005813 | Cellular component | centrosome |
GO_0010008 | Cellular component | endosome membrane |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000813 | Cellular component | ESCRT I complex |
GO_0005515 | Molecular function | protein binding |
Gene name | VPS37A |
Protein name | Vacuolar protein sorting-associated protein 37A (hVps37A) (ESCRT-I complex subunit VPS37A) (Hepatocellular carcinoma-related protein 1) VPS37A subunit of ESCRT-I |
Synonyms | HCRP1 |
Description | FUNCTION: Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies. May be involved in cell growth and differentiation. . FUNCTION: Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies. May be involved in cell growth and differentiation. . |
Accessions | ENST00000521005.1 ENST00000324849.9 [Q8NEZ2-1] E5RJ10 E5RG91 ENST00000425020.6 [Q8NEZ2-3] ENST00000519381.1 E5RHB8 E5RJX6 ENST00000521829.5 [Q8NEZ2-2] Q8NEZ2 ENST00000520140.5 ENST00000521976.1 H0YBN0 ENST00000518038.1 |