Name | Number of supported studies | Average coverage | |
---|---|---|---|
type I pneumocyte | 10 studies | 28% ± 9% | |
endothelial cell | 9 studies | 26% ± 11% | |
pericyte | 8 studies | 38% ± 12% | |
regulatory T cell | 7 studies | 18% ± 2% | |
neuron | 5 studies | 27% ± 10% | |
fibroblast | 5 studies | 19% ± 4% | |
platelet | 5 studies | 20% ± 4% | |
epithelial cell | 5 studies | 38% ± 14% | |
ciliated cell | 5 studies | 25% ± 9% | |
basal cell | 5 studies | 29% ± 12% | |
myofibroblast cell | 4 studies | 19% ± 3% | |
type II pneumocyte | 4 studies | 24% ± 3% | |
GABAergic neuron | 4 studies | 42% ± 15% | |
astrocyte | 4 studies | 24% ± 6% | |
glutamatergic neuron | 4 studies | 53% ± 18% | |
interneuron | 4 studies | 31% ± 20% | |
progenitor cell | 3 studies | 21% ± 2% | |
granule cell | 3 studies | 20% ± 6% | |
microglial cell | 3 studies | 22% ± 2% | |
kidney loop of Henle epithelial cell | 3 studies | 27% ± 4% | |
lymphocyte | 3 studies | 18% ± 2% | |
macrophage | 3 studies | 17% ± 1% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 5% | |
club cell | 3 studies | 29% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1638.75 | 1445 / 1445 | 100% | 18.88 | 183 / 183 |
lung | 100% | 2901.45 | 578 / 578 | 100% | 31.92 | 1155 / 1155 |
ovary | 100% | 1516.18 | 180 / 180 | 100% | 22.06 | 430 / 430 |
stomach | 100% | 1730.62 | 359 / 359 | 100% | 19.37 | 286 / 286 |
brain | 100% | 1588.34 | 2640 / 2642 | 100% | 19.99 | 704 / 705 |
uterus | 100% | 1655.10 | 170 / 170 | 100% | 24.36 | 458 / 459 |
breast | 100% | 1331.80 | 459 / 459 | 100% | 19.45 | 1114 / 1118 |
intestine | 100% | 1410.94 | 966 / 966 | 100% | 20.27 | 525 / 527 |
bladder | 100% | 2083.14 | 21 / 21 | 100% | 25.99 | 502 / 504 |
prostate | 100% | 1580.56 | 245 / 245 | 100% | 18.61 | 500 / 502 |
thymus | 100% | 2067.24 | 653 / 653 | 100% | 32.20 | 602 / 605 |
kidney | 100% | 2656.26 | 89 / 89 | 99% | 27.75 | 896 / 901 |
skin | 100% | 2086.15 | 1808 / 1809 | 99% | 24.52 | 465 / 472 |
pancreas | 99% | 816.51 | 326 / 328 | 99% | 21.47 | 176 / 178 |
adrenal gland | 100% | 1173.45 | 258 / 258 | 96% | 18.37 | 221 / 230 |
liver | 96% | 668.40 | 217 / 226 | 98% | 14.97 | 397 / 406 |
adipose | 100% | 1412.88 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.91 | 29 / 29 |
spleen | 100% | 1726.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 22.76 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.10 | 1 / 1 |
blood vessel | 100% | 1436.52 | 1331 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1099.39 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1242.90 | 847 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 13.96 | 76 / 80 |
peripheral blood | 92% | 981.37 | 856 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042732 | Biological process | D-xylose metabolic process |
GO_0033320 | Biological process | UDP-D-xylose biosynthetic process |
GO_0070062 | Cellular component | extracellular exosome |
GO_1902494 | Cellular component | catalytic complex |
GO_0032580 | Cellular component | Golgi cisterna membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0048040 | Molecular function | UDP-glucuronate decarboxylase activity |
GO_0070403 | Molecular function | NAD+ binding |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0042802 | Molecular function | identical protein binding |
Gene name | UXS1 |
Protein name | UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35) (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) (hUXS) (hUXS1) UDP-glucuronate decarboxylase (EC 4.1.1.35) UDP-glucuronate decarboxylase 1 |
Synonyms | hCG_1812089 UNQ2538/PRO6079 |
Description | FUNCTION: Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose . Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis . . |
Accessions | ENST00000409032.5 [Q8NBZ7-3] ENST00000479621.5 B3KV61 ENST00000441952.5 C9JFU6 ENST00000479774.5 ENST00000436241.1 A0A6Q8PGM4 ENST00000416298.5 C9JW33 ENST00000283148.12 [Q8NBZ7-2] C9J3T9 ENST00000409501.7 [Q8NBZ7-1] ENST00000444193.5 Q8NBZ7 C9JE50 A0A6Q8PH60 ENST00000457835.5 ENST00000483426.5 C9JCB7 A0A6Q8PGN2 |