Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 27% ± 11% | |
B cell | 6 studies | 25% ± 7% | |
glutamatergic neuron | 6 studies | 38% ± 21% | |
epithelial cell | 6 studies | 41% ± 15% | |
basal cell | 6 studies | 25% ± 8% | |
ciliated cell | 6 studies | 24% ± 8% | |
macrophage | 6 studies | 23% ± 6% | |
classical monocyte | 5 studies | 27% ± 11% | |
naive B cell | 5 studies | 21% ± 8% | |
neuron | 5 studies | 25% ± 6% | |
interneuron | 5 studies | 32% ± 19% | |
microglial cell | 5 studies | 25% ± 7% | |
oligodendrocyte precursor cell | 5 studies | 24% ± 10% | |
GABAergic neuron | 5 studies | 36% ± 16% | |
astrocyte | 5 studies | 24% ± 6% | |
goblet cell | 5 studies | 30% ± 11% | |
natural killer cell | 4 studies | 20% ± 5% | |
myeloid cell | 4 studies | 28% ± 5% | |
oligodendrocyte | 4 studies | 23% ± 5% | |
non-classical monocyte | 3 studies | 29% ± 12% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 24% ± 5% | |
CD8-positive, alpha-beta T cell | 3 studies | 22% ± 4% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 23% ± 4% | |
hematopoietic precursor cell | 3 studies | 26% ± 7% | |
mature NK T cell | 3 studies | 19% ± 2% | |
squamous epithelial cell | 3 studies | 33% ± 19% | |
club cell | 3 studies | 22% ± 6% | |
lymphocyte | 3 studies | 26% ± 3% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 24% ± 9% | |
fibroblast | 3 studies | 21% ± 4% | |
pericyte | 3 studies | 19% ± 5% | |
abnormal cell | 3 studies | 23% ± 7% | |
enteroendocrine cell | 3 studies | 19% ± 4% | |
plasmacytoid dendritic cell | 3 studies | 21% ± 5% | |
transit amplifying cell | 3 studies | 30% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 7268.17 | 459 / 459 | 100% | 83.06 | 1118 / 1118 |
esophagus | 100% | 8905.79 | 1445 / 1445 | 100% | 59.62 | 183 / 183 |
intestine | 100% | 9579.36 | 966 / 966 | 100% | 64.58 | 527 / 527 |
prostate | 100% | 7396.18 | 245 / 245 | 100% | 62.87 | 502 / 502 |
stomach | 100% | 6636.26 | 359 / 359 | 100% | 60.58 | 286 / 286 |
lung | 100% | 7042.63 | 578 / 578 | 100% | 49.43 | 1153 / 1155 |
bladder | 100% | 8054.62 | 21 / 21 | 100% | 57.03 | 503 / 504 |
skin | 100% | 9946.56 | 1809 / 1809 | 100% | 50.58 | 471 / 472 |
uterus | 100% | 8833.82 | 170 / 170 | 100% | 54.03 | 458 / 459 |
brain | 100% | 6048.67 | 2634 / 2642 | 100% | 54.34 | 705 / 705 |
kidney | 100% | 4905.91 | 89 / 89 | 100% | 37.21 | 898 / 901 |
liver | 100% | 4096.65 | 226 / 226 | 100% | 27.03 | 404 / 406 |
thymus | 100% | 7043.54 | 653 / 653 | 100% | 47.74 | 602 / 605 |
pancreas | 100% | 4335.71 | 328 / 328 | 99% | 46.81 | 177 / 178 |
ovary | 100% | 7148.13 | 180 / 180 | 99% | 30.91 | 426 / 430 |
adrenal gland | 100% | 6323.88 | 258 / 258 | 98% | 41.80 | 226 / 230 |
adipose | 100% | 7171.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7806.87 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 40.87 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 62.92 | 29 / 29 |
muscle | 100% | 10160.28 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 9010.81 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 29.41 | 1 / 1 |
heart | 98% | 5027.89 | 848 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 6387.23 | 900 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0032435 | Biological process | negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
GO_0045721 | Biological process | negative regulation of gluconeogenesis |
GO_0075342 | Biological process | symbiont-mediated disruption of host cell PML body |
GO_0044027 | Biological process | negative regulation of gene expression via chromosomal CpG island methylation |
GO_0035520 | Biological process | monoubiquitinated protein deubiquitination |
GO_1905279 | Biological process | regulation of retrograde transport, endosome to Golgi |
GO_0032088 | Biological process | negative regulation of NF-kappaB transcription factor activity |
GO_0042752 | Biological process | regulation of circadian rhythm |
GO_0006307 | Biological process | DNA alkylation repair |
GO_0050821 | Biological process | protein stabilization |
GO_0006508 | Biological process | proteolysis |
GO_1901796 | Biological process | regulation of signal transduction by p53 class mediator |
GO_0016579 | Biological process | protein deubiquitination |
GO_0051090 | Biological process | regulation of DNA-binding transcription factor activity |
GO_0048511 | Biological process | rhythmic process |
GO_0006283 | Biological process | transcription-coupled nucleotide-excision repair |
GO_1904262 | Biological process | negative regulation of TORC1 signaling |
GO_0031647 | Biological process | regulation of protein stability |
GO_1904353 | Biological process | regulation of telomere capping |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016604 | Cellular component | nuclear body |
GO_0005829 | Cellular component | cytosol |
GO_0016605 | Cellular component | PML body |
GO_0005694 | Cellular component | chromosome |
GO_0005634 | Cellular component | nucleus |
GO_0101005 | Molecular function | deubiquitinase activity |
GO_0004843 | Molecular function | cysteine-type deubiquitinase activity |
GO_1990380 | Molecular function | K48-linked deubiquitinase activity |
GO_0002039 | Molecular function | p53 binding |
GO_0004197 | Molecular function | cysteine-type endopeptidase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | USP7 |
Protein name | Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.4.19.12) (Deubiquitinating enzyme 7) (Herpesvirus-associated ubiquitin-specific protease) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) Ubiquitin specific peptidase 7 Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.4.19.12) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7) Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12) |
Synonyms | HAUSP |
Description | FUNCTION: Hydrolase that deubiquitinates target proteins such as FOXO4, DEPTOR, KAT5, p53/TP53, MDM2, ERCC6, DNMT1, UHRF1, PTEN, KMT2E/MLL5 and DAXX . Together with DAXX, prevents MDM2 self-ubiquitination and enhances the E3 ligase activity of MDM2 towards p53/TP53, thereby promoting p53/TP53 ubiquitination and proteasomal degradation . Deubiquitinates p53/TP53, preventing degradation of p53/TP53, and enhances p53/TP53-dependent transcription regulation, cell growth repression and apoptosis . Deubiquitinates p53/TP53 and MDM2 and strongly stabilizes p53/TP53 even in the presence of excess MDM2, and also induces p53/TP53-dependent cell growth repression and apoptosis . Deubiquitination of FOXO4 in presence of hydrogen peroxide is not dependent on p53/TP53 and inhibits FOXO4-induced transcriptional activity . In association with DAXX, is involved in the deubiquitination and translocation of PTEN from the nucleus to the cytoplasm, both processes that are counteracted by PML . Deubiquitinates KMT2E/MLL5 preventing KMT2E/MLL5 proteasomal-mediated degradation . Involved in cell proliferation during early embryonic development. Involved in transcription-coupled nucleotide excision repair (TC-NER) in response to UV damage: recruited to DNA damage sites following interaction with KIAA1530/UVSSA and promotes deubiquitination of ERCC6, preventing UV-induced degradation of ERCC6 . Involved in maintenance of DNA methylation via its interaction with UHRF1 and DNMT1: acts by mediating deubiquitination of UHRF1 and DNMT1, preventing their degradation and promoting DNA methylation by DNMT1 . Deubiquitinates alkylation repair enzyme ALKBH3. OTUD4 recruits USP7 and USP9X to stabilize ALKBH3, thereby promoting the repair of alkylated DNA lesions . Acts as a chromatin regulator via its association with the Polycomb group (PcG) multiprotein PRC1-like complex; may act by deubiquitinating components of the PRC1-like complex . Able to mediate deubiquitination of histone H2B; it is however unsure whether this activity takes place in vivo . Exhibits a preference towards 'Lys-48'-linked ubiquitin chains . Increases regulatory T-cells (Treg) suppressive capacity by deubiquitinating and stabilizing the transcription factor FOXP3 which is crucial for Treg cell function . Plays a role in the maintenance of the circadian clock periodicity via deubiquitination and stabilization of the CRY1 and CRY2 proteins . Deubiquitinates REST, thereby stabilizing REST and promoting the maintenance of neural progenitor cells . Deubiquitinates SIRT7, inhibiting SIRT7 histone deacetylase activity and regulating gluconeogenesis . Involved in the regulation of WASH-dependent actin polymerization at the surface of endosomes and the regulation of endosomal protein recycling . It maintains optimal WASH complex activity and precise F-actin levels via deubiquitination of TRIM27 and WASHC1 . Mediates the deubiquitination of phosphorylated DEPTOR, promoting its stability and leading to decreased mTORC1 signaling . .; FUNCTION: (Microbial infection) Contributes to the overall stabilization and trans-activation capability of the herpesvirus 1 trans-acting transcriptional protein ICP0/VMW110 during HSV-1 infection. .; FUNCTION: (Microbial infection) Upon infection with Epstein-Barr virus, the interaction with viral EBNA1 increases the association of USP7 with PML proteins, which is required for the polyubiquitylation and degradation of PML. . FUNCTION: Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. . FUNCTION: Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. . |
Accessions | ENST00000542333.5 H3BQD1 ENST00000673704.1 ENST00000563043.1 H3BND8 H3BRI4 Q93009 F5H2X1 ENST00000344836.9 [Q93009-1] H3BRA2 ENST00000565455.5 ENST00000566004.5 ENST00000563085.5 ENST00000563961.5 H3BUV0 H3BVA7 ENST00000566273.5 ENST00000569230.5 ENST00000381886.8 [Q93009-3] A0A669KBL1 H3BTM1 I3L2D8 ENST00000567692.1 H3BMF6 ENST00000564117.1 |