USP42 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	7 studies	22% ± 7%	Explore
microglial cell	5 studies	20% ± 3%	Explore
astrocyte	5 studies	24% ± 5%	Explore
glutamatergic neuron	5 studies	37% ± 15%	Explore
epithelial cell	4 studies	27% ± 9%	Explore
oligodendrocyte precursor cell	4 studies	22% ± 5%	Explore
interneuron	4 studies	31% ± 17%	Explore
oligodendrocyte	4 studies	20% ± 1%	Explore
ciliated cell	3 studies	24% ± 5%	Explore
GABAergic neuron	3 studies	39% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	30% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	998.44	1445 / 1445	100%	16.81	183 / 183
intestine	100%	1174.20	966 / 966	100%	10.30	527 / 527
ovary	100%	1349.93	180 / 180	100%	12.09	430 / 430
lung	100%	1212.13	578 / 578	100%	10.93	1153 / 1155
breast	100%	1183.71	459 / 459	100%	11.88	1115 / 1118
stomach	100%	801.85	359 / 359	100%	12.35	285 / 286
prostate	100%	1126.56	245 / 245	99%	9.35	499 / 502
brain	99%	897.79	2628 / 2642	100%	12.18	704 / 705
bladder	100%	1106.43	21 / 21	99%	9.22	500 / 504
thymus	100%	1255.50	653 / 653	99%	7.77	599 / 605
uterus	100%	1423.05	170 / 170	99%	9.08	454 / 459
pancreas	100%	588.01	328 / 328	99%	7.50	176 / 178
skin	100%	1353.20	1809 / 1809	98%	10.70	463 / 472
kidney	100%	865.51	89 / 89	98%	7.77	879 / 901
adrenal gland	100%	783.45	258 / 258	91%	4.75	209 / 230
liver	100%	566.87	226 / 226	87%	4.36	352 / 406
adipose	100%	1099.23	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1019.86	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	7.54	29 / 29
spleen	100%	1113.58	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	8.55	45 / 45
ureter	0%	0	0 / 0	100%	2.55	1 / 1
muscle	100%	678.54	801 / 803	0%	0	0 / 0
heart	99%	540.48	849 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	95%	5.54	76 / 80
peripheral blood	82%	617.21	763 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0