Insufficient scRNA-seq data for expression of USP21 at single-cell level.
Insufficient scRNA-seq data for expression of USP21 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1871.20 | 1445 / 1445 | 100% | 32.01 | 183 / 183 |
ovary | 100% | 2656.94 | 180 / 180 | 100% | 49.93 | 430 / 430 |
skin | 100% | 1869.48 | 1809 / 1809 | 100% | 31.40 | 472 / 472 |
uterus | 100% | 2574.18 | 170 / 170 | 100% | 37.54 | 459 / 459 |
lung | 100% | 1636.71 | 578 / 578 | 100% | 32.37 | 1154 / 1155 |
brain | 100% | 1590.68 | 2638 / 2642 | 100% | 36.99 | 705 / 705 |
stomach | 100% | 1579.17 | 359 / 359 | 100% | 25.64 | 285 / 286 |
prostate | 100% | 2321.07 | 245 / 245 | 100% | 28.45 | 500 / 502 |
breast | 100% | 1835.75 | 459 / 459 | 100% | 41.72 | 1113 / 1118 |
thymus | 100% | 2479.40 | 653 / 653 | 100% | 29.00 | 602 / 605 |
intestine | 100% | 1963.01 | 966 / 966 | 99% | 24.62 | 524 / 527 |
bladder | 100% | 2070.95 | 21 / 21 | 99% | 35.86 | 499 / 504 |
pancreas | 100% | 1061.45 | 328 / 328 | 99% | 24.10 | 176 / 178 |
kidney | 100% | 1682.70 | 89 / 89 | 97% | 18.56 | 870 / 901 |
adrenal gland | 100% | 1839.63 | 258 / 258 | 96% | 17.69 | 221 / 230 |
liver | 100% | 732.30 | 225 / 226 | 85% | 13.67 | 345 / 406 |
adipose | 100% | 1482.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 24.77 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.68 | 29 / 29 |
spleen | 100% | 2267.05 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 22.00 | 1 / 1 |
blood vessel | 100% | 1486.48 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1355.10 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 991.40 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 966.74 | 892 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006508 | Biological process | proteolysis |
GO_0045815 | Biological process | transcription initiation-coupled chromatin remodeling |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0019784 | Molecular function | deNEDDylase activity |
GO_0008234 | Molecular function | cysteine-type peptidase activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0004843 | Molecular function | cysteine-type deubiquitinase activity |
Gene name | USP21 |
Protein name | Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.4.19.12) (Deubiquitinating enzyme 21) (Ubiquitin thioesterase 21) (Ubiquitin-specific-processing protease 21) Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12) Alternative protein USP21 Ubiquitin specific peptidase 21 |
Synonyms | USP23 PP1490 |
Description | FUNCTION: Deubiquitinates histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator (By similarity). Deubiquitination of histone H2A releaves the repression of di- and trimethylation of histone H3 at 'Lys-4', resulting in regulation of transcriptional initiation (By similarity). Regulates gene expression via histone H2A deubiquitination (By similarity). Deubiquitinates BAZ2A/TIP5 leading to its stabilization . Also capable of removing NEDD8 from NEDD8 conjugates but has no effect on Sentrin-1 conjugates . Also acts as a negative regulator of the ribosome quality control (RQC) by mediating deubiquitination of 40S ribosomal proteins RPS10/eS10 and RPS20/uS10, thereby antagonizing ZNF598-mediated 40S ubiquitination . . FUNCTION: Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. . |
Accessions | ENST00000486299.5 A0A1W2PRX0 V9GY36 A0A8Q3SIU3 L8E8G0 V9GYJ6 ENST00000696603.1 ENST00000289865.12 [Q9UK80-1] ENST00000368001.1 [Q9UK80-3] ENST00000368002.8 [Q9UK80-1] ENST00000493054.5 ENST00000492950.5 A0A1W2PQ32 Q9UK80 ENST00000479344.1 |