Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 6 studies | 33% ± 19% | |
endothelial cell | 3 studies | 20% ± 4% | |
amacrine cell | 3 studies | 29% ± 4% | |
retinal bipolar neuron | 3 studies | 18% ± 3% | |
retina horizontal cell | 3 studies | 21% ± 5% | |
epithelial cell | 3 studies | 25% ± 6% | |
GABAergic neuron | 3 studies | 34% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 33% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 4172.17 | 170 / 170 | 100% | 50.93 | 459 / 459 |
esophagus | 100% | 4889.89 | 1444 / 1445 | 100% | 36.96 | 183 / 183 |
thymus | 100% | 6957.12 | 653 / 653 | 100% | 42.76 | 604 / 605 |
prostate | 100% | 4546.95 | 245 / 245 | 100% | 62.74 | 501 / 502 |
adrenal gland | 100% | 5502.74 | 258 / 258 | 100% | 49.39 | 229 / 230 |
ovary | 100% | 3161.33 | 180 / 180 | 100% | 42.49 | 428 / 430 |
kidney | 100% | 5679.13 | 89 / 89 | 99% | 39.87 | 896 / 901 |
breast | 100% | 3806.75 | 459 / 459 | 99% | 42.05 | 1111 / 1118 |
stomach | 100% | 3449.60 | 359 / 359 | 99% | 31.12 | 284 / 286 |
intestine | 100% | 5415.93 | 966 / 966 | 99% | 35.88 | 523 / 527 |
bladder | 100% | 3488.67 | 21 / 21 | 99% | 40.99 | 500 / 504 |
lung | 99% | 3835.65 | 572 / 578 | 100% | 39.11 | 1151 / 1155 |
pancreas | 100% | 3072.91 | 327 / 328 | 99% | 40.52 | 176 / 178 |
brain | 98% | 6546.52 | 2588 / 2642 | 100% | 55.39 | 705 / 705 |
skin | 98% | 7551.31 | 1771 / 1809 | 100% | 61.82 | 472 / 472 |
liver | 100% | 2624.68 | 226 / 226 | 98% | 27.66 | 397 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 43.87 | 29 / 29 |
spleen | 100% | 8292.85 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 41.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 45.81 | 1 / 1 |
adipose | 100% | 3326.78 | 1201 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 3126.65 | 796 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 39.20 | 79 / 80 |
blood vessel | 97% | 2315.51 | 1301 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 2641.89 | 820 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 79% | 1691.26 | 731 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0018105 | Biological process | peptidyl-serine phosphorylation |
GO_0007224 | Biological process | smoothened signaling pathway |
GO_0072537 | Biological process | fibroblast activation |
GO_0000045 | Biological process | autophagosome assembly |
GO_0034727 | Biological process | piecemeal microautophagy of the nucleus |
GO_0045879 | Biological process | negative regulation of smoothened signaling pathway |
GO_0042594 | Biological process | response to starvation |
GO_0045880 | Biological process | positive regulation of smoothened signaling pathway |
GO_0010506 | Biological process | regulation of autophagy |
GO_0000422 | Biological process | autophagy of mitochondrion |
GO_0090398 | Biological process | cellular senescence |
GO_0061709 | Biological process | reticulophagy |
GO_0006914 | Biological process | autophagy |
GO_0046777 | Biological process | protein autophosphorylation |
GO_0034045 | Cellular component | phagophore assembly site membrane |
GO_0097542 | Cellular component | ciliary tip |
GO_0005829 | Cellular component | cytosol |
GO_0005776 | Cellular component | autophagosome |
GO_0000407 | Cellular component | phagophore assembly site |
GO_0005737 | Cellular component | cytoplasm |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ULK3 |
Protein name | non-specific serine/threonine protein kinase (EC 2.7.11.1) Serine/threonine-protein kinase ULK3 (EC 2.7.11.1) (Unc-51-like kinase 3) Unc-51 like kinase 3 |
Synonyms | |
Description | FUNCTION: Serine/threonine protein kinase that acts as a regulator of Sonic hedgehog (SHH) signaling and autophagy. Acts as a negative regulator of SHH signaling in the absence of SHH ligand: interacts with SUFU, thereby inactivating the protein kinase activity and preventing phosphorylation of GLI proteins (GLI1, GLI2 and/or GLI3). Positively regulates SHH signaling in the presence of SHH: dissociates from SUFU, autophosphorylates and mediates phosphorylation of GLI2, activating it and promoting its nuclear translocation. Phosphorylates in vitro GLI2, as well as GLI1 and GLI3, although less efficiently. Also acts as a regulator of autophagy: following cellular senescence, able to induce autophagy. . |
Accessions | ENST00000562161.5 H3BTS3 H3BT78 ENST00000563301.5 H3BS27 ENST00000647587.1 H3BV76 H3BP85 ENST00000631115.1 ENST00000440863.7 [Q6PHR2-1] ENST00000566631.5 H3BPN6 ENST00000565790.5 ENST00000568273.5 ENST00000569437.5 [Q6PHR2-3] Q6PHR2 ENST00000568210.5 ENST00000565373.5 ENST00000568667.5 [Q6PHR2-4] H3BMW8 ENST00000568679.1 |