Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 26% ± 8% | |
epithelial cell | 6 studies | 27% ± 9% | |
oligodendrocyte | 6 studies | 24% ± 6% | |
macrophage | 6 studies | 23% ± 7% | |
microglial cell | 5 studies | 23% ± 5% | |
astrocyte | 5 studies | 29% ± 9% | |
GABAergic neuron | 4 studies | 41% ± 15% | |
glutamatergic neuron | 4 studies | 50% ± 17% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 6% | |
goblet cell | 3 studies | 30% ± 10% | |
transit amplifying cell | 3 studies | 29% ± 13% | |
interneuron | 3 studies | 42% ± 20% | |
erythroblast | 3 studies | 24% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2980.99 | 1445 / 1445 | 100% | 47.70 | 183 / 183 |
breast | 100% | 3249.03 | 459 / 459 | 100% | 38.76 | 1117 / 1118 |
lung | 100% | 3987.05 | 578 / 578 | 100% | 38.02 | 1153 / 1155 |
intestine | 100% | 3445.47 | 966 / 966 | 100% | 34.97 | 526 / 527 |
prostate | 100% | 3338.17 | 245 / 245 | 100% | 32.42 | 501 / 502 |
stomach | 100% | 3136.41 | 359 / 359 | 100% | 38.60 | 285 / 286 |
uterus | 100% | 3460.36 | 170 / 170 | 100% | 29.60 | 457 / 459 |
liver | 100% | 3493.57 | 226 / 226 | 100% | 26.79 | 404 / 406 |
thymus | 100% | 3844.11 | 653 / 653 | 99% | 24.25 | 600 / 605 |
skin | 100% | 5373.05 | 1808 / 1809 | 99% | 37.75 | 468 / 472 |
bladder | 100% | 3434.52 | 21 / 21 | 99% | 28.27 | 499 / 504 |
pancreas | 100% | 4117.99 | 328 / 328 | 99% | 26.61 | 176 / 178 |
brain | 99% | 1973.25 | 2609 / 2642 | 100% | 21.75 | 704 / 705 |
ovary | 100% | 2536.67 | 180 / 180 | 98% | 20.25 | 421 / 430 |
kidney | 100% | 2578.16 | 89 / 89 | 97% | 23.49 | 873 / 901 |
adrenal gland | 100% | 3984.93 | 258 / 258 | 90% | 17.29 | 208 / 230 |
adipose | 100% | 3442.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3785.72 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.48 | 29 / 29 |
muscle | 100% | 4133.29 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4312.57 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 32.44 | 45 / 45 |
heart | 98% | 2613.91 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3259.44 | 908 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 14.28 | 71 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0018279 | Biological process | protein N-linked glycosylation via asparagine |
GO_0097359 | Biological process | UDP-glucosylation |
GO_0051084 | Biological process | 'de novo' post-translational protein folding |
GO_0036503 | Biological process | ERAD pathway |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0003980 | Molecular function | UDP-glucose:glycoprotein glucosyltransferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0051082 | Molecular function | unfolded protein binding |
Gene name | UGGT1 |
Protein name | UDP-glucose glycoprotein glucosyltransferase 1 Alternative protein UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 (UGT1) (hUGT1) (EC 2.4.1.-) (UDP--Glc:glycoprotein glucosyltransferase) (UDP-glucose ceramide glucosyltransferase-like 1) |
Synonyms | UGCGL1 UGGT UGTR GT UGT1 |
Description | FUNCTION: Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation. . |
Accessions | ENST00000376723.7 F8WCI2 H7BZG0 L8ECI4 Q9NYU2 ENST00000430075.5 ENST00000438277.5 ENST00000418197.1 ENST00000259253.11 [Q9NYU2-1] E2QRN8 F8WCE6 |