Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 41% ± 25% | |
GABAergic neuron | 6 studies | 52% ± 18% | |
neuron | 5 studies | 27% ± 9% | |
interneuron | 5 studies | 51% ± 27% | |
macrophage | 5 studies | 21% ± 4% | |
oligodendrocyte precursor cell | 5 studies | 25% ± 8% | |
oligodendrocyte | 5 studies | 27% ± 9% | |
microglial cell | 4 studies | 20% ± 5% | |
astrocyte | 4 studies | 30% ± 13% | |
endothelial cell | 3 studies | 37% ± 12% | |
retinal bipolar neuron | 3 studies | 22% ± 5% | |
GABAergic amacrine cell | 3 studies | 24% ± 10% | |
glycinergic amacrine cell | 3 studies | 23% ± 5% | |
retinal rod cell | 3 studies | 20% ± 4% | |
rod bipolar cell | 3 studies | 30% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1671.98 | 245 / 245 | 100% | 63.90 | 502 / 502 |
brain | 100% | 1060.12 | 2636 / 2642 | 100% | 19.17 | 703 / 705 |
breast | 100% | 822.47 | 459 / 459 | 98% | 23.17 | 1099 / 1118 |
ovary | 100% | 1512.46 | 180 / 180 | 97% | 11.33 | 419 / 430 |
stomach | 100% | 720.25 | 359 / 359 | 94% | 9.52 | 270 / 286 |
esophagus | 100% | 710.46 | 1438 / 1445 | 95% | 11.26 | 173 / 183 |
uterus | 100% | 1082.64 | 170 / 170 | 94% | 13.11 | 431 / 459 |
intestine | 100% | 814.38 | 965 / 966 | 94% | 9.29 | 493 / 527 |
lung | 99% | 791.25 | 575 / 578 | 94% | 8.93 | 1083 / 1155 |
pancreas | 99% | 521.99 | 326 / 328 | 94% | 6.92 | 167 / 178 |
thymus | 99% | 552.16 | 649 / 653 | 85% | 5.67 | 516 / 605 |
adrenal gland | 95% | 433.18 | 245 / 258 | 88% | 8.10 | 203 / 230 |
bladder | 100% | 603.10 | 21 / 21 | 83% | 7.94 | 417 / 504 |
skin | 100% | 765.40 | 1805 / 1809 | 81% | 7.40 | 381 / 472 |
kidney | 96% | 358.73 | 85 / 89 | 84% | 9.41 | 760 / 901 |
liver | 92% | 273.40 | 207 / 226 | 80% | 6.05 | 324 / 406 |
blood vessel | 100% | 1211.89 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 936.29 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 777.81 | 1202 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 12.31 | 41 / 45 |
heart | 88% | 359.93 | 760 / 861 | 0% | 0 | 0 / 0 |
muscle | 87% | 257.24 | 698 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 4.89 | 21 / 29 |
peripheral blood | 61% | 297.18 | 566 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 60% | 4.21 | 48 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008150 | Biological process | biological_process |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005515 | Molecular function | protein binding |
Gene name | TXNDC16 |
Protein name | Thioredoxin domain containing 16 TXNDC16 protein Thioredoxin domain-containing protein 16 |
Synonyms | ERP90 KIAA1344 |
Description | |
Accessions | H0YJI6 G3V2S5 Q9P2K2 ENST00000557374.1 ENST00000555312.1 ENST00000281741.9 B7ZME4 |