Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 34 studies | 26% ± 11% | |
endothelial cell | 32 studies | 29% ± 10% | |
smooth muscle cell | 27 studies | 30% ± 12% | |
endothelial cell of lymphatic vessel | 23 studies | 44% ± 14% | |
pericyte | 22 studies | 26% ± 9% | |
myofibroblast cell | 14 studies | 27% ± 11% | |
plasmacytoid dendritic cell | 12 studies | 24% ± 5% | |
connective tissue cell | 11 studies | 26% ± 9% | |
vein endothelial cell | 11 studies | 30% ± 9% | |
endothelial cell of vascular tree | 11 studies | 37% ± 15% | |
type I pneumocyte | 9 studies | 27% ± 12% | |
endothelial cell of artery | 8 studies | 22% ± 4% | |
capillary endothelial cell | 8 studies | 22% ± 7% | |
adipocyte | 8 studies | 37% ± 6% | |
macrophage | 6 studies | 23% ± 9% | |
basal cell | 6 studies | 33% ± 7% | |
B cell | 6 studies | 20% ± 5% | |
dendritic cell | 6 studies | 27% ± 7% | |
myeloid cell | 5 studies | 22% ± 5% | |
conventional dendritic cell | 4 studies | 25% ± 8% | |
adventitial cell | 4 studies | 37% ± 18% | |
squamous epithelial cell | 3 studies | 28% ± 9% | |
classical monocyte | 3 studies | 20% ± 4% | |
extravillous trophoblast | 3 studies | 53% ± 11% | |
precursor B cell | 3 studies | 22% ± 5% | |
erythroblast | 3 studies | 43% ± 19% | |
alveolar macrophage | 3 studies | 22% ± 8% | |
erythrocyte | 3 studies | 36% ± 15% | |
myoepithelial cell | 3 studies | 36% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 98% | 9913.53 | 1764 / 1809 | 98% | 85.38 | 462 / 472 |
breast | 99% | 8946.65 | 455 / 459 | 95% | 49.39 | 1064 / 1118 |
uterus | 99% | 8984.14 | 169 / 170 | 95% | 134.53 | 434 / 459 |
lung | 99% | 6306.78 | 571 / 578 | 94% | 66.68 | 1085 / 1155 |
esophagus | 100% | 15139.49 | 1445 / 1445 | 91% | 86.24 | 166 / 183 |
prostate | 97% | 5551.64 | 237 / 245 | 92% | 33.52 | 460 / 502 |
ovary | 97% | 4537.53 | 175 / 180 | 89% | 37.61 | 384 / 430 |
thymus | 88% | 2932.26 | 577 / 653 | 92% | 50.93 | 555 / 605 |
bladder | 95% | 8884.76 | 20 / 21 | 78% | 62.71 | 394 / 504 |
intestine | 87% | 8877.14 | 840 / 966 | 75% | 27.61 | 394 / 527 |
stomach | 60% | 4472.26 | 214 / 359 | 77% | 30.66 | 221 / 286 |
kidney | 44% | 1440.48 | 39 / 89 | 88% | 47.56 | 794 / 901 |
pancreas | 19% | 470.85 | 62 / 328 | 94% | 65.70 | 167 / 178 |
adrenal gland | 54% | 1399.67 | 139 / 258 | 55% | 18.23 | 126 / 230 |
tonsil | 0% | 0 | 0 / 0 | 100% | 126.78 | 45 / 45 |
adipose | 100% | 12262.78 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9912.24 | 1332 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 42.09 | 77 / 80 |
heart | 95% | 6765.91 | 821 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 40.97 | 25 / 29 |
brain | 7% | 174.55 | 173 / 2642 | 58% | 29.62 | 407 / 705 |
spleen | 54% | 1337.85 | 130 / 241 | 0% | 0 | 0 / 0 |
liver | 10% | 275.28 | 23 / 226 | 31% | 14.00 | 127 / 406 |
peripheral blood | 16% | 784.50 | 152 / 929 | 0% | 0 | 0 / 0 |
muscle | 10% | 272.58 | 79 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0072686 | Cellular component | mitotic spindle |
GO_0070062 | Cellular component | extracellular exosome |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005874 | Cellular component | microtubule |
GO_0045171 | Cellular component | intercellular bridge |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005525 | Molecular function | GTP binding |
GO_0005200 | Molecular function | structural constituent of cytoskeleton |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
GO_0046872 | Molecular function | metal ion binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | TUBB6 |
Protein name | Tubulin beta 6 class V Tubulin beta-6 chain (Tubulin beta class V) Tubulin beta chain |
Synonyms | hCG_1641604 |
Description | FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . |
Accessions | ENST00000586691.1 Q2NKY5 K7EQT3 K7ES63 ENST00000590967.5 ENST00000590103.5 K7EJZ4 ENST00000586653.5 Q9BUF5 K7EL29 ENST00000586810.5 ENST00000590693.5 ENST00000590388.5 K7EN98 K7EK43 ENST00000591463.1 K7ERA8 K7EPE5 K7EJ64 B3KS31 ENST00000591208.1 K7ESQ3 K7ESM5 ENST00000317702.10 ENST00000591909.5 ENST00000592683.5 |