Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| fibroblast | 34 studies | 26% ± 11% | |
| endothelial cell | 32 studies | 29% ± 10% | |
| smooth muscle cell | 27 studies | 30% ± 12% | |
| endothelial cell of lymphatic vessel | 23 studies | 44% ± 14% | |
| pericyte | 22 studies | 26% ± 9% | |
| myofibroblast cell | 14 studies | 27% ± 11% | |
| plasmacytoid dendritic cell | 12 studies | 24% ± 5% | |
| connective tissue cell | 11 studies | 26% ± 9% | |
| vein endothelial cell | 11 studies | 30% ± 9% | |
| endothelial cell of vascular tree | 11 studies | 37% ± 15% | |
| type I pneumocyte | 9 studies | 27% ± 12% | |
| endothelial cell of artery | 8 studies | 22% ± 4% | |
| capillary endothelial cell | 8 studies | 22% ± 7% | |
| adipocyte | 8 studies | 37% ± 6% | |
| macrophage | 6 studies | 23% ± 9% | |
| basal cell | 6 studies | 33% ± 7% | |
| B cell | 6 studies | 20% ± 5% | |
| dendritic cell | 6 studies | 27% ± 7% | |
| myeloid cell | 5 studies | 22% ± 5% | |
| conventional dendritic cell | 4 studies | 25% ± 8% | |
| adventitial cell | 4 studies | 37% ± 18% | |
| squamous epithelial cell | 3 studies | 28% ± 9% | |
| classical monocyte | 3 studies | 20% ± 4% | |
| extravillous trophoblast | 3 studies | 53% ± 11% | |
| precursor B cell | 3 studies | 22% ± 5% | |
| erythroblast | 3 studies | 43% ± 19% | |
| alveolar macrophage | 3 studies | 22% ± 8% | |
| erythrocyte | 3 studies | 36% ± 15% | |
| myoepithelial cell | 3 studies | 36% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| skin | 98% | 9913.53 | 1764 / 1809 | 98% | 85.38 | 462 / 472 |
| breast | 99% | 8946.65 | 455 / 459 | 95% | 49.39 | 1064 / 1118 |
| uterus | 99% | 8984.14 | 169 / 170 | 95% | 134.53 | 434 / 459 |
| lung | 99% | 6306.78 | 571 / 578 | 94% | 66.68 | 1085 / 1155 |
| esophagus | 100% | 15139.49 | 1445 / 1445 | 91% | 86.24 | 166 / 183 |
| prostate | 97% | 5551.64 | 237 / 245 | 92% | 33.52 | 460 / 502 |
| ovary | 97% | 4537.53 | 175 / 180 | 89% | 37.61 | 384 / 430 |
| thymus | 88% | 2932.26 | 577 / 653 | 92% | 50.93 | 555 / 605 |
| bladder | 95% | 8884.76 | 20 / 21 | 78% | 62.71 | 394 / 504 |
| intestine | 87% | 8877.14 | 840 / 966 | 75% | 27.61 | 394 / 527 |
| stomach | 60% | 4472.26 | 214 / 359 | 77% | 30.66 | 221 / 286 |
| kidney | 44% | 1440.48 | 39 / 89 | 88% | 47.56 | 794 / 901 |
| pancreas | 19% | 470.85 | 62 / 328 | 94% | 65.70 | 167 / 178 |
| adrenal gland | 54% | 1399.67 | 139 / 258 | 55% | 18.23 | 126 / 230 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 126.78 | 45 / 45 |
| adipose | 100% | 12262.78 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 9912.24 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 96% | 42.09 | 77 / 80 |
| heart | 95% | 6765.91 | 821 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 86% | 40.97 | 25 / 29 |
| brain | 7% | 174.55 | 173 / 2642 | 58% | 29.62 | 407 / 705 |
| spleen | 54% | 1337.85 | 130 / 241 | 0% | 0 | 0 / 0 |
| liver | 10% | 275.28 | 23 / 226 | 31% | 14.00 | 127 / 406 |
| peripheral blood | 16% | 784.50 | 152 / 929 | 0% | 0 | 0 / 0 |
| muscle | 10% | 272.58 | 79 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0000278 | Biological process | mitotic cell cycle |
| GO_0000226 | Biological process | microtubule cytoskeleton organization |
| GO_0072686 | Cellular component | mitotic spindle |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0015630 | Cellular component | microtubule cytoskeleton |
| GO_0005874 | Cellular component | microtubule |
| GO_0045171 | Cellular component | intercellular bridge |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0005525 | Molecular function | GTP binding |
| GO_0005200 | Molecular function | structural constituent of cytoskeleton |
| GO_0005515 | Molecular function | protein binding |
| GO_0003674 | Molecular function | molecular_function |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0003924 | Molecular function | GTPase activity |
| Gene name | TUBB6 |
| Protein name | Tubulin beta 6 class V Tubulin beta-6 chain (Tubulin beta class V) Tubulin beta chain |
| Synonyms | hCG_1641604 |
| Description | FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . |
| Accessions | ENST00000586691.1 Q2NKY5 K7EQT3 K7ES63 ENST00000590967.5 ENST00000590103.5 K7EJZ4 ENST00000586653.5 Q9BUF5 K7EL29 ENST00000586810.5 ENST00000590693.5 ENST00000590388.5 K7EN98 K7EK43 ENST00000591463.1 K7ERA8 K7EPE5 K7EJ64 B3KS31 ENST00000591208.1 K7ESQ3 K7ESM5 ENST00000317702.10 ENST00000591909.5 ENST00000592683.5 |