Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 29 studies | 34% ± 15% | |
fibroblast | 11 studies | 23% ± 5% | |
endothelial cell of lymphatic vessel | 10 studies | 34% ± 16% | |
capillary endothelial cell | 8 studies | 24% ± 8% | |
endothelial cell of artery | 7 studies | 23% ± 8% | |
vein endothelial cell | 6 studies | 28% ± 18% | |
cardiac muscle cell | 5 studies | 40% ± 8% | |
endothelial cell of vascular tree | 5 studies | 32% ± 16% | |
GABAergic neuron | 5 studies | 33% ± 11% | |
glutamatergic neuron | 4 studies | 31% ± 4% | |
retinal bipolar neuron | 4 studies | 32% ± 16% | |
hepatocyte | 4 studies | 58% ± 22% | |
pericyte | 4 studies | 23% ± 3% | |
smooth muscle cell | 4 studies | 22% ± 1% | |
granule cell | 3 studies | 36% ± 9% | |
epithelial cell | 3 studies | 28% ± 10% | |
GABAergic amacrine cell | 3 studies | 20% ± 4% | |
ON-bipolar cell | 3 studies | 37% ± 9% | |
rod bipolar cell | 3 studies | 46% ± 11% | |
basal cell | 3 studies | 32% ± 21% | |
interneuron | 3 studies | 37% ± 11% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5907.97 | 245 / 245 | 100% | 54.79 | 502 / 502 |
kidney | 100% | 8080.48 | 89 / 89 | 100% | 77.93 | 898 / 901 |
breast | 100% | 5251.00 | 459 / 459 | 99% | 50.16 | 1107 / 1118 |
liver | 100% | 5684.00 | 226 / 226 | 98% | 32.21 | 399 / 406 |
thymus | 100% | 3981.48 | 652 / 653 | 98% | 39.23 | 591 / 605 |
uterus | 100% | 6835.00 | 170 / 170 | 97% | 41.85 | 446 / 459 |
skin | 98% | 4062.09 | 1774 / 1809 | 97% | 36.55 | 458 / 472 |
ovary | 100% | 6832.19 | 180 / 180 | 95% | 25.05 | 408 / 430 |
lung | 100% | 7141.36 | 578 / 578 | 93% | 28.47 | 1073 / 1155 |
adrenal gland | 100% | 2475.44 | 258 / 258 | 93% | 24.80 | 213 / 230 |
bladder | 100% | 3741.19 | 21 / 21 | 91% | 23.21 | 459 / 504 |
pancreas | 91% | 1419.20 | 298 / 328 | 97% | 38.85 | 172 / 178 |
esophagus | 100% | 3203.42 | 1445 / 1445 | 85% | 20.23 | 155 / 183 |
intestine | 99% | 3018.64 | 956 / 966 | 82% | 16.27 | 433 / 527 |
stomach | 95% | 2240.91 | 340 / 359 | 82% | 15.05 | 235 / 286 |
brain | 78% | 5504.82 | 2070 / 2642 | 88% | 15.94 | 622 / 705 |
adipose | 100% | 5085.10 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 36.69 | 80 / 80 |
heart | 100% | 11454.50 | 861 / 861 | 0% | 0 | 0 / 0 |
spleen | 100% | 4208.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 37.27 | 45 / 45 |
blood vessel | 100% | 4853.50 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 79% | 1122.15 | 635 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 1.67 | 5 / 29 |
peripheral blood | 4% | 44.38 | 37 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008150 | Biological process | biological_process |
GO_0097197 | Cellular component | tetraspanin-enriched microdomain |
GO_0005886 | Cellular component | plasma membrane |
GO_0005925 | Cellular component | focal adhesion |
GO_0003674 | Molecular function | molecular_function |
Gene name | TSPAN9 |
Protein name | Tetraspanin-9 (Tspan-9) (Tetraspan NET-5) Tetraspanin Tetraspanin 9 |
Synonyms | NET5 |
Description | |
Accessions | A0A3B3IST1 O75954 A0A1W2PQ04 ENST00000407263.2 ENST00000537971.5 ENST00000444315.6 ENST00000649909.1 ENST00000011898.10 B5MD23 ENST00000640568.1 E9PHL0 |