Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 7 studies | 31% ± 9% | |
| epithelial cell | 5 studies | 32% ± 11% | |
| goblet cell | 5 studies | 29% ± 15% | |
| plasma cell | 4 studies | 28% ± 7% | |
| naive B cell | 4 studies | 18% ± 2% | |
| B cell | 4 studies | 18% ± 2% | |
| basal cell | 3 studies | 27% ± 8% | |
| abnormal cell | 3 studies | 21% ± 6% | |
| plasmacytoid dendritic cell | 3 studies | 26% ± 3% |
Insufficient scRNA-seq data for expression of TRPT1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| adrenal gland | 100% | 1436.84 | 258 / 258 | 100% | 27.97 | 230 / 230 |
| esophagus | 100% | 1158.22 | 1445 / 1445 | 100% | 23.57 | 183 / 183 |
| ovary | 100% | 1025.09 | 180 / 180 | 100% | 42.81 | 430 / 430 |
| pancreas | 100% | 1057.08 | 328 / 328 | 100% | 29.97 | 178 / 178 |
| thymus | 100% | 1585.83 | 653 / 653 | 100% | 40.73 | 605 / 605 |
| uterus | 100% | 1019.88 | 170 / 170 | 100% | 33.02 | 459 / 459 |
| prostate | 100% | 1610.11 | 245 / 245 | 100% | 54.64 | 501 / 502 |
| kidney | 100% | 1761.63 | 89 / 89 | 100% | 34.54 | 899 / 901 |
| liver | 100% | 933.37 | 226 / 226 | 100% | 25.95 | 405 / 406 |
| brain | 100% | 886.92 | 2633 / 2642 | 100% | 36.05 | 705 / 705 |
| intestine | 100% | 1295.72 | 966 / 966 | 100% | 35.07 | 525 / 527 |
| skin | 100% | 949.49 | 1803 / 1809 | 100% | 29.02 | 471 / 472 |
| stomach | 100% | 1208.18 | 359 / 359 | 99% | 28.74 | 284 / 286 |
| bladder | 100% | 1189.76 | 21 / 21 | 99% | 38.46 | 500 / 504 |
| lung | 100% | 918.00 | 576 / 578 | 99% | 28.45 | 1149 / 1155 |
| breast | 100% | 1153.15 | 459 / 459 | 99% | 30.82 | 1105 / 1118 |
| adipose | 100% | 1033.44 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 29.90 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 40.51 | 29 / 29 |
| muscle | 100% | 3379.01 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 1428.23 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 27.58 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 67.16 | 1 / 1 |
| blood vessel | 100% | 1129.96 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| heart | 100% | 1685.60 | 857 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 88% | 652.58 | 818 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006388 | Biological process | tRNA splicing, via endonucleolytic cleavage and ligation |
| GO_0008150 | Biological process | biological_process |
| GO_0000215 | Molecular function | tRNA 2'-phosphotransferase activity |
| GO_0003674 | Molecular function | molecular_function |
| Gene name | TRPT1 |
| Protein name | tRNA phosphotransferase 1 tRNA 2'-phosphotransferase 1 (EC 2.7.1.160) 2'-phosphotransferase (EC 2.7.1.160) |
| Synonyms | |
| Description | FUNCTION: Catalyzes the last step of tRNA splicing, the transfer of the splice junction 2'-phosphate from ligated tRNA to NAD to produce ADP-ribose 1''-2'' cyclic phosphate. . FUNCTION: Catalyzes the last step of tRNA splicing, the transfer of the splice junction 2'-phosphate from ligated tRNA to NAD to produce ADP-ribose 1''-2'' cyclic phosphate. . FUNCTION: Catalyzes the last step of tRNA splicing, the transfer of the splice junction 2'-phosphate from ligated tRNA to NAD to produce ADP-ribose 1''-2'' cyclic phosphate. . |
| Accessions | F5H8A0 ENST00000546133.5 ENST00000394547.7 [Q86TN4-2] F5H6B6 F5H1K3 ENST00000317459.11 [Q86TN4-1] ENST00000546089.5 H0YGY9 ENST00000544286.5 ENST00000545812.1 ENST00000541278.5 [Q86TN4-3] Q86TN4 ENST00000394546.6 [Q86TN4-4] |
