Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 9 studies | 36% ± 20% | |
| ciliated cell | 7 studies | 27% ± 5% | |
| retina horizontal cell | 6 studies | 46% ± 18% | |
| retinal cone cell | 6 studies | 38% ± 11% | |
| endothelial cell of lymphatic vessel | 6 studies | 36% ± 9% | |
| retinal rod cell | 5 studies | 30% ± 13% | |
| GABAergic neuron | 5 studies | 45% ± 20% | |
| retinal bipolar neuron | 4 studies | 34% ± 11% | |
| astrocyte | 4 studies | 26% ± 4% | |
| interneuron | 4 studies | 52% ± 19% | |
| epithelial cell | 3 studies | 57% ± 29% | |
| OFF-bipolar cell | 3 studies | 51% ± 9% | |
| amacrine cell | 3 studies | 44% ± 15% | |
| rod bipolar cell | 3 studies | 54% ± 17% | |
| goblet cell | 3 studies | 32% ± 18% | |
| granule cell | 3 studies | 41% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| thymus | 100% | 15994.73 | 653 / 653 | 95% | 10.30 | 572 / 605 |
| kidney | 98% | 1514.96 | 87 / 89 | 84% | 3.67 | 757 / 901 |
| brain | 97% | 5677.17 | 2553 / 2642 | 71% | 2.99 | 501 / 705 |
| skin | 93% | 713.14 | 1681 / 1809 | 60% | 2.27 | 284 / 472 |
| pancreas | 93% | 544.11 | 306 / 328 | 47% | 1.01 | 84 / 178 |
| breast | 91% | 1095.71 | 418 / 459 | 45% | 1.27 | 504 / 1118 |
| lung | 98% | 806.07 | 565 / 578 | 17% | 0.37 | 201 / 1155 |
| prostate | 89% | 608.09 | 219 / 245 | 19% | 0.26 | 93 / 502 |
| liver | 85% | 533.01 | 192 / 226 | 21% | 0.70 | 86 / 406 |
| esophagus | 85% | 874.82 | 1222 / 1445 | 20% | 0.62 | 37 / 183 |
| spleen | 98% | 775.47 | 235 / 241 | 0% | 0 | 0 / 0 |
| heart | 97% | 1596.32 | 832 / 861 | 0% | 0 | 0 / 0 |
| intestine | 70% | 446.31 | 678 / 966 | 25% | 0.52 | 131 / 527 |
| uterus | 59% | 358.66 | 100 / 170 | 28% | 0.79 | 130 / 459 |
| blood vessel | 82% | 852.39 | 1095 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 77% | 390.93 | 933 / 1204 | 0% | 0 | 0 / 0 |
| bladder | 57% | 354.00 | 12 / 21 | 18% | 0.46 | 90 / 504 |
| stomach | 52% | 231.30 | 188 / 359 | 21% | 0.52 | 60 / 286 |
| eye | 0% | 0 | 0 / 0 | 57% | 2.00 | 46 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 38% | 0.66 | 17 / 45 |
| muscle | 33% | 143.58 | 269 / 803 | 0% | 0 | 0 / 0 |
| ovary | 17% | 63.58 | 30 / 180 | 12% | 0.24 | 52 / 430 |
| adrenal gland | 10% | 45.93 | 25 / 258 | 11% | 0.32 | 25 / 230 |
| lymph node | 0% | 0 | 0 / 0 | 7% | 0.08 | 2 / 29 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0002098 | Biological process | tRNA wobble uridine modification |
| GO_0006400 | Biological process | tRNA modification |
| GO_0030488 | Biological process | tRNA methylation |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0000049 | Molecular function | tRNA binding |
| GO_0008175 | Molecular function | tRNA methyltransferase activity |
| GO_0008757 | Molecular function | S-adenosylmethionine-dependent methyltransferase activity |
| GO_0106335 | Molecular function | tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity |
| Gene name | TRMT9B |
| Protein name | Probable tRNA methyltransferase 9B (Probable tRNA methyltransferase 9-like protein) (EC 2.1.1.-) tRNA methyltransferase 9B (putative) |
| Synonyms | C8orf79 TRM9L KIAA1456 |
| Description | FUNCTION: May modify wobble uridines in specific arginine and glutamic acid tRNAs. Acts as a tumor suppressor by promoting the expression of LIN9. . |
| Accessions | ENST00000528753.2 [Q9P272-3] F6XBY7 ENST00000524591.7 [Q9P272-1] ENST00000532376.2 E9PK20 ENST00000447063.6 Q9P272 ENST00000400069.7 [Q9P272-3] |