Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 9 studies | 46% ± 25% | |
glutamatergic neuron | 8 studies | 56% ± 24% | |
endothelial cell | 8 studies | 25% ± 6% | |
fibroblast | 8 studies | 24% ± 11% | |
oligodendrocyte | 8 studies | 28% ± 10% | |
astrocyte | 7 studies | 32% ± 18% | |
oligodendrocyte precursor cell | 7 studies | 27% ± 6% | |
epithelial cell | 5 studies | 31% ± 6% | |
retinal cone cell | 5 studies | 35% ± 20% | |
interneuron | 5 studies | 58% ± 32% | |
adipocyte | 4 studies | 24% ± 8% | |
retinal rod cell | 4 studies | 24% ± 6% | |
neuron | 3 studies | 22% ± 9% | |
retinal bipolar neuron | 3 studies | 19% ± 3% | |
ciliated cell | 3 studies | 19% ± 4% | |
GABAergic amacrine cell | 3 studies | 26% ± 11% | |
amacrine cell | 3 studies | 31% ± 15% | |
glycinergic amacrine cell | 3 studies | 26% ± 6% | |
rod bipolar cell | 3 studies | 23% ± 9% | |
hepatocyte | 3 studies | 44% ± 33% | |
retinal pigment epithelial cell | 3 studies | 34% ± 22% | |
connective tissue cell | 3 studies | 19% ± 1% | |
basal cell | 3 studies | 28% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1074.41 | 1445 / 1445 | 100% | 9.18 | 183 / 183 |
lung | 99% | 920.58 | 575 / 578 | 100% | 7.63 | 1155 / 1155 |
intestine | 100% | 1087.78 | 966 / 966 | 99% | 9.54 | 524 / 527 |
brain | 99% | 1029.09 | 2627 / 2642 | 100% | 9.41 | 703 / 705 |
ovary | 100% | 1376.68 | 180 / 180 | 99% | 6.86 | 426 / 430 |
stomach | 100% | 906.99 | 359 / 359 | 99% | 9.14 | 283 / 286 |
thymus | 100% | 1343.49 | 653 / 653 | 99% | 10.43 | 597 / 605 |
breast | 100% | 1141.76 | 459 / 459 | 99% | 7.41 | 1102 / 1118 |
prostate | 100% | 1225.44 | 245 / 245 | 98% | 6.29 | 493 / 502 |
bladder | 100% | 953.52 | 21 / 21 | 98% | 7.66 | 492 / 504 |
pancreas | 100% | 549.59 | 327 / 328 | 98% | 7.43 | 174 / 178 |
uterus | 100% | 1698.77 | 170 / 170 | 97% | 9.01 | 447 / 459 |
kidney | 100% | 936.82 | 89 / 89 | 96% | 6.64 | 868 / 901 |
adrenal gland | 100% | 967.69 | 258 / 258 | 95% | 7.36 | 218 / 230 |
liver | 100% | 1421.49 | 226 / 226 | 91% | 5.41 | 370 / 406 |
skin | 100% | 756.33 | 1804 / 1809 | 85% | 5.02 | 403 / 472 |
blood vessel | 100% | 1267.55 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 841.53 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 958.55 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 98% | 542.80 | 788 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 636.21 | 823 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 6.29 | 43 / 45 |
lymph node | 0% | 0 | 0 / 0 | 90% | 5.51 | 26 / 29 |
eye | 0% | 0 | 0 / 0 | 45% | 1.68 | 36 / 80 |
peripheral blood | 26% | 433.08 | 240 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032259 | Biological process | methylation |
GO_0008033 | Biological process | tRNA processing |
GO_0005737 | Cellular component | cytoplasm |
GO_0160102 | Molecular function | tRNA (guanine(10)-N2)-methyltransferase activity |
GO_0000049 | Molecular function | tRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0008168 | Molecular function | methyltransferase activity |
Gene name | TRMT11 |
Protein name | tRNA (guanine(10)-N2)-methyltransferase homolog (EC 2.1.1.-) (tRNA guanosine-2'-O-methyltransferase TRM11 homolog) tRNA methyltransferase 11 homolog tRNA (guanine(10)-N2)-methyltransferase homolog |
Synonyms | C6orf75 MDS024 |
Description | FUNCTION: Catalytic subunit of an S-adenosyl-L-methionine-dependent tRNA methyltransferase complex that mediates the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs. . |
Accessions | ENST00000368332.7 [Q7Z4G4-2] K7ENP1 ENST00000444121.5 Q7Z4G4 ENST00000466316 Q5JY02 ENST00000479748.5 [Q7Z4G4-3] K7EJQ4 ENST00000334379.11 [Q7Z4G4-1] ENST00000461129.5 ENST00000446681.1 Q5JY01 V9GXZ6 ENST00000468097.5 K7EPZ4 ENST00000648977.1 ENST00000473273.1 |