Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 5 studies | 28% ± 13% | |
astrocyte | 5 studies | 26% ± 6% | |
endothelial cell | 4 studies | 20% ± 2% | |
epithelial cell | 4 studies | 22% ± 3% | |
glutamatergic neuron | 4 studies | 38% ± 16% | |
oligodendrocyte | 4 studies | 27% ± 3% | |
adipocyte | 3 studies | 19% ± 4% | |
microglial cell | 3 studies | 21% ± 4% | |
oligodendrocyte precursor cell | 3 studies | 33% ± 1% | |
interneuron | 3 studies | 30% ± 15% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 32% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 934.82 | 459 / 459 | 100% | 12.70 | 1118 / 1118 |
esophagus | 100% | 888.51 | 1445 / 1445 | 100% | 8.31 | 183 / 183 |
prostate | 100% | 1230.94 | 245 / 245 | 100% | 11.20 | 502 / 502 |
brain | 100% | 748.40 | 2641 / 2642 | 100% | 14.52 | 705 / 705 |
bladder | 100% | 1078.00 | 21 / 21 | 100% | 8.06 | 503 / 504 |
uterus | 100% | 1205.76 | 170 / 170 | 100% | 8.58 | 458 / 459 |
thymus | 100% | 1142.60 | 653 / 653 | 100% | 10.80 | 603 / 605 |
stomach | 100% | 726.58 | 359 / 359 | 100% | 8.01 | 285 / 286 |
pancreas | 100% | 588.91 | 328 / 328 | 99% | 8.21 | 177 / 178 |
intestine | 100% | 1040.99 | 966 / 966 | 99% | 8.23 | 524 / 527 |
lung | 100% | 726.25 | 577 / 578 | 99% | 8.14 | 1147 / 1155 |
ovary | 100% | 1254.35 | 180 / 180 | 99% | 7.34 | 425 / 430 |
kidney | 100% | 755.29 | 89 / 89 | 98% | 8.11 | 886 / 901 |
adrenal gland | 100% | 884.13 | 258 / 258 | 98% | 7.43 | 225 / 230 |
skin | 100% | 752.28 | 1808 / 1809 | 97% | 7.07 | 457 / 472 |
liver | 100% | 446.84 | 226 / 226 | 90% | 4.47 | 364 / 406 |
adipose | 100% | 775.99 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 889.74 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.14 | 29 / 29 |
spleen | 100% | 1093.37 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.53 | 1 / 1 |
heart | 98% | 414.54 | 848 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 7.20 | 44 / 45 |
muscle | 97% | 339.62 | 781 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 6.93 | 73 / 80 |
peripheral blood | 88% | 407.26 | 817 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045039 | Biological process | protein insertion into mitochondrial inner membrane |
GO_0002939 | Biological process | tRNA N1-guanine methylation |
GO_0042721 | Cellular component | TIM22 mitochondrial import inner membrane insertion complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005634 | Cellular component | nucleus |
GO_0000049 | Molecular function | tRNA binding |
GO_0052905 | Molecular function | tRNA (guanosine(9)-N1)-methyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TRMT10B |
Protein name | tRNA methyltransferase 10B tRNA methyltransferase 10 homolog B (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 3) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10B) |
Synonyms | RG9MTD3 |
Description | FUNCTION: S-adenosyl-L-methionine-dependent guanine N(1)-methyltransferase that catalyzes the formation of N(1)-methylguanine at position 9 (m1G9) in tRNAs . Probably not able to catalyze formation of N(1)-methyladenine at position 9 (m1A9) in tRNAs . . |
Accessions | F5H380 F5H598 ENST00000537911.5 [Q6PF06-5] ENST00000537016.5 ENST00000538370.5 ENST00000540616.5 ENST00000377754.6 [Q6PF06-2] ENST00000488673.6 [Q6PF06-3] F5H4N3 Q6PF06 ENST00000297994.4 [Q6PF06-1] ENST00000377753.6 [Q6PF06-4] |