Insufficient scRNA-seq data for expression of TRIM10 at single-cell level.
Insufficient scRNA-seq data for expression of TRIM10 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 252.22 | 226 / 226 | 76% | 2.71 | 309 / 406 |
kidney | 96% | 270.51 | 85 / 89 | 74% | 3.82 | 663 / 901 |
intestine | 67% | 177.33 | 648 / 966 | 86% | 2.81 | 453 / 527 |
stomach | 3% | 1.84 | 12 / 359 | 81% | 2.33 | 233 / 286 |
peripheral blood | 81% | 313.27 | 752 / 929 | 0% | 0 | 0 / 0 |
spleen | 71% | 105.49 | 171 / 241 | 0% | 0 | 0 / 0 |
lung | 50% | 36.98 | 291 / 578 | 15% | 0.36 | 173 / 1155 |
pancreas | 3% | 0.88 | 10 / 328 | 62% | 1.66 | 110 / 178 |
esophagus | 16% | 8.83 | 236 / 1445 | 44% | 1.60 | 80 / 183 |
skin | 56% | 59.94 | 1005 / 1809 | 0% | 0.00 | 1 / 472 |
bladder | 0% | 0 | 0 / 21 | 23% | 0.68 | 118 / 504 |
uterus | 0% | 0 | 0 / 170 | 15% | 0.57 | 67 / 459 |
adipose | 3% | 1.31 | 32 / 1204 | 0% | 0 | 0 / 0 |
ovary | 1% | 0.14 | 1 / 180 | 2% | 0.04 | 9 / 430 |
breast | 2% | 1.03 | 8 / 459 | 1% | 0.01 | 10 / 1118 |
thymus | 2% | 0.53 | 14 / 653 | 0% | 0.00 | 1 / 605 |
adrenal gland | 0% | 0 | 0 / 258 | 2% | 0.06 | 5 / 230 |
heart | 1% | 0.41 | 11 / 861 | 0% | 0 | 0 / 0 |
prostate | 1% | 0.18 | 2 / 245 | 0% | 0 | 0 / 502 |
blood vessel | 1% | 0.19 | 9 / 1335 | 0% | 0 | 0 / 0 |
brain | 1% | 0.16 | 14 / 2642 | 0% | 0 | 0 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030218 | Biological process | erythrocyte differentiation |
GO_0016567 | Biological process | protein ubiquitination |
GO_0046597 | Biological process | negative regulation of viral entry into host cell |
GO_0008150 | Biological process | biological_process |
GO_0045087 | Biological process | innate immune response |
GO_0005737 | Cellular component | cytoplasm |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | TRIM10 |
Protein name | Tripartite motif-containing protein 10 (B30-RING finger protein) (RING finger protein 9) |
Synonyms | RNF9 RFB30 |
Description | FUNCTION: E3 ligase that plays an essential role in the differentiation and survival of terminal erythroid cells. May directly bind to PTEN and promote its ubiquitination, resulting in its proteasomal degradation and activation of hypertrophic signaling (By similarity). In addition, plays a role in immune response regulation by repressing the phosphorylation of STAT1 and STAT2 in the interferon/JAK/STAT signaling pathway independent of its E3 ligase activity. Mechanistically, interacts with the intracellular domain of IFNAR1 and thereby inhibits the association between TYK2 and IFNAR1 . . |
Accessions | ENST00000447465.2 [Q9UDY6-2] ENST00000446013.2 [Q9UDY6-2] ENST00000451727.2 [Q9UDY6-1] ENST00000413055.2 [Q9UDY6-2] ENST00000354038.10 [Q9UDY6-1] ENST00000428611.6 [Q9UDY6-2] ENST00000456988.6 [Q9UDY6-1] Q9UDY6 ENST00000449208.6 [Q9UDY6-1] ENST00000449742.7 [Q9UDY6-1] ENST00000376704.3 [Q9UDY6-2] ENST00000259941.6 [Q9UDY6-2] ENST00000426996.6 [Q9UDY6-1] ENST00000416714.2 [Q9UDY6-2] ENST00000417411.6 [Q9UDY6-2] ENST00000431258.6 [Q9UDY6-1] ENST00000448645.2 [Q9UDY6-1] |