TRAPPC6B | OmnibusX

Name	Number of supported studies	Average coverage
endothelial cell	5 studies	23% ± 5%	Explore
oligodendrocyte	5 studies	21% ± 3%	Explore
neuron	4 studies	26% ± 9%	Explore
epithelial cell	4 studies	29% ± 7%	Explore
astrocyte	4 studies	25% ± 5%	Explore
glutamatergic neuron	4 studies	54% ± 21%	Explore
interneuron	4 studies	37% ± 22%	Explore
GABAergic neuron	3 studies	55% ± 3%	Explore
oligodendrocyte precursor cell	3 studies	29% ± 4%	Explore

Name	Number of supported studies	Average coverage
brain	5 studies	40% ± 17%	Explore
eye	3 studies	18% ± 2%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	2308.91	1445 / 1445	99%	3.87	181 / 183
lung	100%	1870.18	578 / 578	98%	3.90	1131 / 1155
stomach	100%	1491.76	359 / 359	96%	2.94	274 / 286
intestine	100%	1973.21	966 / 966	95%	2.77	501 / 527
brain	100%	3395.00	2640 / 2642	95%	3.86	667 / 705
pancreas	100%	1054.11	327 / 328	94%	3.07	168 / 178
breast	100%	2005.45	459 / 459	94%	3.97	1050 / 1118
bladder	100%	2199.33	21 / 21	90%	2.70	456 / 504
prostate	100%	2065.24	245 / 245	89%	2.85	447 / 502
thymus	100%	2374.46	653 / 653	88%	3.25	534 / 605
skin	100%	1922.28	1808 / 1809	86%	2.92	406 / 472
kidney	100%	1796.60	89 / 89	85%	3.11	770 / 901
uterus	100%	1958.04	170 / 170	85%	2.88	390 / 459
ovary	100%	1745.43	180 / 180	83%	2.14	358 / 430
adrenal gland	100%	2344.44	258 / 258	81%	3.37	186 / 230
liver	100%	1485.32	226 / 226	65%	1.40	265 / 406
adipose	100%	1951.25	1204 / 1204	0%	0	0 / 0
blood vessel	100%	2120.96	1335 / 1335	0%	0	0 / 0
muscle	100%	1601.08	803 / 803	0%	0	0 / 0
spleen	100%	2060.03	241 / 241	0%	0	0 / 0
heart	98%	1337.30	845 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	89%	3.17	40 / 45
peripheral blood	73%	913.09	681 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	72%	2.34	21 / 29
eye	0%	0	0 / 0	49%	1.17	39 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006888	Biological process	endoplasmic reticulum to Golgi vesicle-mediated transport
GO_0006901	Biological process	vesicle coating
GO_0007399	Biological process	nervous system development
GO_0099022	Biological process	vesicle tethering
GO_0005802	Cellular component	trans-Golgi network
GO_1990071	Cellular component	TRAPPII protein complex
GO_0030008	Cellular component	TRAPP complex
GO_0005801	Cellular component	cis-Golgi network
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005829	Cellular component	cytosol
GO_0005737	Cellular component	cytoplasm
GO_0005515	Molecular function	protein binding

Gene name	TRAPPC6B
Protein name	Alternative protein TRAPPC6B Trafficking protein particle complex subunit 6B Trafficking protein particle complex subunit 6B (TRAPP complex subunit 6B) Trafficking protein particle complex 6B, isoform CRA_a (cDNA, FLJ79549, highly similar to Trafficking protein particle complex subunit6B)
Synonyms	hCG_1641028
Description	FUNCTION: Component of a transport protein particle (TRAPP) complex that may function in specific stages of inter-organelle traffic . Specifically involved in the early development of neural circuitry, likely by controlling the frequency and amplitude of intracellular calcium transients implicated in the regulation of neuron differentiation and survival (Probable). .
Accessions	ENST00000555269.5 ENST00000330149.10 [Q86SZ2-1] B0AZV9 ENST00000556765.1 ENST00000347691.9 [Q86SZ2-2] G3V4C3 ENST00000554018.1 G3V2H7 L8E9R9 Q86SZ2

TRAPPC6B report