Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 10 studies | 30% ± 11% | |
astrocyte | 8 studies | 33% ± 16% | |
fibroblast | 8 studies | 24% ± 8% | |
macrophage | 7 studies | 28% ± 9% | |
glutamatergic neuron | 6 studies | 36% ± 21% | |
microglial cell | 6 studies | 31% ± 11% | |
oligodendrocyte precursor cell | 6 studies | 36% ± 17% | |
pericyte | 6 studies | 24% ± 11% | |
oligodendrocyte | 6 studies | 33% ± 9% | |
interneuron | 5 studies | 41% ± 23% | |
neuron | 5 studies | 40% ± 17% | |
adipocyte | 5 studies | 19% ± 3% | |
GABAergic neuron | 5 studies | 39% ± 19% | |
epithelial cell | 4 studies | 35% ± 5% | |
endothelial cell of lymphatic vessel | 4 studies | 19% ± 3% | |
granule cell | 3 studies | 23% ± 2% | |
cardiac muscle cell | 3 studies | 17% ± 1% | |
ciliated cell | 3 studies | 25% ± 1% | |
myeloid cell | 3 studies | 18% ± 0% | |
dendritic cell | 3 studies | 23% ± 7% | |
lymphocyte | 3 studies | 22% ± 4% | |
basal cell | 3 studies | 29% ± 11% | |
goblet cell | 3 studies | 32% ± 19% | |
smooth muscle cell | 3 studies | 20% ± 2% | |
plasmacytoid dendritic cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2630.27 | 1445 / 1445 | 100% | 15.64 | 183 / 183 |
liver | 100% | 1667.73 | 226 / 226 | 100% | 11.39 | 406 / 406 |
ovary | 100% | 2848.18 | 180 / 180 | 100% | 15.81 | 430 / 430 |
prostate | 100% | 2798.78 | 245 / 245 | 100% | 19.55 | 502 / 502 |
skin | 100% | 3282.42 | 1809 / 1809 | 100% | 16.60 | 472 / 472 |
stomach | 100% | 2088.69 | 359 / 359 | 100% | 14.57 | 286 / 286 |
thymus | 100% | 3474.47 | 653 / 653 | 100% | 21.71 | 605 / 605 |
breast | 100% | 2531.60 | 459 / 459 | 100% | 15.58 | 1117 / 1118 |
intestine | 100% | 2647.47 | 966 / 966 | 100% | 14.75 | 526 / 527 |
bladder | 100% | 2818.57 | 21 / 21 | 100% | 15.49 | 503 / 504 |
uterus | 100% | 3078.92 | 170 / 170 | 100% | 16.87 | 458 / 459 |
lung | 100% | 2150.13 | 577 / 578 | 100% | 15.70 | 1154 / 1155 |
kidney | 100% | 2067.58 | 89 / 89 | 100% | 13.99 | 898 / 901 |
brain | 100% | 2150.62 | 2633 / 2642 | 100% | 24.53 | 705 / 705 |
adrenal gland | 100% | 2680.98 | 258 / 258 | 100% | 18.52 | 229 / 230 |
pancreas | 99% | 1320.66 | 326 / 328 | 100% | 14.89 | 178 / 178 |
adipose | 100% | 2375.05 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2561.78 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 21.23 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.43 | 29 / 29 |
spleen | 100% | 2654.08 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.70 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.90 | 1 / 1 |
muscle | 100% | 2323.38 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 2582.00 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 1707.57 | 873 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1905342 | Biological process | positive regulation of protein localization to kinetochore |
GO_0007030 | Biological process | Golgi organization |
GO_0099022 | Biological process | vesicle tethering |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0090234 | Biological process | regulation of kinetochore assembly |
GO_0048208 | Biological process | COPII vesicle coating |
GO_0051310 | Biological process | metaphase chromosome alignment |
GO_0030008 | Cellular component | TRAPP complex |
GO_0000776 | Cellular component | kinetochore |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_1990072 | Cellular component | TRAPPIII protein complex |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | TRAPPC12 |
Protein name | Trafficking protein particle complex subunit 12 Trafficking protein particle complex subunit 12 (Tetratricopeptide repeat protein 15) (TPR repeat protein 15) (TTC-15) (Trafficking of membranes and mitosis) |
Synonyms | TTC15 TRAMM CGI-87 |
Description | FUNCTION: Component of the TRAPP complex, which is involved in endoplasmic reticulum to Golgi apparatus trafficking at a very early stage . Also plays a role in chromosome congression, kinetochore assembly and stability and controls the recruitment of CENPE to the kinetochores . . |
Accessions | ENST00000324266.10 H7C0T3 ENST00000628660.2 Q53QD4 ENST00000457845.4 H0Y550 ENST00000441099.5 H7C0K3 H7C373 A0A0G2JQW1 ENST00000417243.5 H7C1E5 F8WCB4 H7C185 ENST00000411973.3 A0A0J9YXQ9 H7C2F7 ENST00000441983.5 H7C1M4 ENST00000416918.5 ENST00000415624.5 Q8WVT3 ENST00000618133.3 ENST00000437733.5 ENST00000452495.1 ENST00000631737.1 ENST00000382110.6 |