TPRN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	5 studies	19% ± 2%	Explore
oligodendrocyte	4 studies	25% ± 6%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	3016.63	2638 / 2642	100%	21.99	703 / 705
pancreas	100%	6149.54	328 / 328	99%	21.42	177 / 178
ovary	99%	772.63	178 / 180	100%	24.60	428 / 430
prostate	99%	1114.50	243 / 245	99%	30.03	498 / 502
bladder	100%	973.00	21 / 21	97%	25.33	489 / 504
thymus	99%	780.85	646 / 653	97%	11.10	588 / 605
skin	99%	1414.66	1790 / 1809	97%	17.74	458 / 472
uterus	98%	657.28	166 / 170	98%	16.90	448 / 459
stomach	96%	2575.42	344 / 359	99%	42.26	283 / 286
liver	100%	1713.16	225 / 226	95%	20.08	384 / 406
intestine	94%	2180.08	911 / 966	99%	49.16	522 / 527
lung	97%	1085.47	560 / 578	94%	14.61	1080 / 1155
esophagus	93%	1063.41	1345 / 1445	97%	22.80	178 / 183
kidney	100%	2106.97	89 / 89	89%	16.35	799 / 901
adrenal gland	95%	600.79	245 / 258	89%	12.02	204 / 230
breast	87%	615.90	398 / 459	97%	29.03	1079 / 1118
eye	0%	0	0 / 0	100%	46.95	80 / 80
lymph node	0%	0	0 / 0	100%	11.54	29 / 29
tonsil	0%	0	0 / 0	100%	14.98	45 / 45
ureter	0%	0	0 / 0	100%	18.39	1 / 1
spleen	99%	662.12	238 / 241	0%	0	0 / 0
blood vessel	85%	419.89	1129 / 1335	0%	0	0 / 0
adipose	79%	402.74	955 / 1204	0%	0	0 / 0
muscle	77%	390.22	620 / 803	0%	0	0 / 0
heart	77%	516.02	663 / 861	0%	0	0 / 0
peripheral blood	38%	230.90	354 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0