Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell of lymphatic vessel | 11 studies | 23% ± 6% | |
oligodendrocyte precursor cell | 10 studies | 29% ± 10% | |
smooth muscle cell | 10 studies | 21% ± 4% | |
retina horizontal cell | 6 studies | 31% ± 9% | |
mast cell | 6 studies | 21% ± 3% | |
glutamatergic neuron | 5 studies | 35% ± 18% | |
endothelial cell | 5 studies | 26% ± 12% | |
cardiac muscle cell | 5 studies | 38% ± 1% | |
pancreatic A cell | 4 studies | 41% ± 18% | |
GABAergic neuron | 4 studies | 25% ± 7% | |
pancreatic D cell | 3 studies | 45% ± 22% | |
type B pancreatic cell | 3 studies | 60% ± 4% | |
neuron | 3 studies | 29% ± 11% | |
mesothelial cell | 3 studies | 23% ± 4% | |
adipocyte | 3 studies | 18% ± 2% | |
myofibroblast cell | 3 studies | 19% ± 1% | |
granule cell | 3 studies | 22% ± 4% | |
erythrocyte | 3 studies | 30% ± 5% | |
interneuron | 3 studies | 37% ± 15% | |
microglial cell | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 99% | 4071.11 | 178 / 180 | 94% | 49.02 | 405 / 430 |
adrenal gland | 98% | 4109.52 | 254 / 258 | 90% | 138.08 | 207 / 230 |
brain | 81% | 1614.74 | 2147 / 2642 | 99% | 63.08 | 697 / 705 |
thymus | 94% | 1647.30 | 611 / 653 | 51% | 7.61 | 307 / 605 |
uterus | 98% | 4298.51 | 167 / 170 | 30% | 8.82 | 137 / 459 |
bladder | 95% | 3080.76 | 20 / 21 | 11% | 1.41 | 56 / 504 |
prostate | 52% | 990.71 | 128 / 245 | 53% | 4.86 | 268 / 502 |
pancreas | 52% | 831.52 | 169 / 328 | 50% | 9.93 | 89 / 178 |
blood vessel | 100% | 4796.57 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 10845.22 | 803 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 8145.44 | 817 / 861 | 0% | 0 | 0 / 0 |
lung | 77% | 1066.79 | 443 / 578 | 17% | 2.64 | 195 / 1155 |
eye | 0% | 0 | 0 / 0 | 91% | 36.89 | 73 / 80 |
liver | 47% | 774.04 | 107 / 226 | 41% | 6.01 | 168 / 406 |
breast | 80% | 1165.05 | 366 / 459 | 8% | 1.02 | 92 / 1118 |
esophagus | 65% | 3126.54 | 946 / 1445 | 19% | 2.21 | 34 / 183 |
adipose | 82% | 1323.52 | 983 / 1204 | 0% | 0 | 0 / 0 |
intestine | 70% | 1589.22 | 675 / 966 | 9% | 1.30 | 50 / 527 |
stomach | 53% | 985.95 | 192 / 359 | 16% | 2.76 | 45 / 286 |
skin | 8% | 95.97 | 147 / 1809 | 51% | 8.75 | 242 / 472 |
kidney | 16% | 160.99 | 14 / 89 | 23% | 2.79 | 209 / 901 |
peripheral blood | 37% | 560.59 | 347 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 7.46 | 4 / 29 |
tonsil | 0% | 0 | 0 / 0 | 11% | 2.48 | 5 / 45 |
spleen | 0% | 3.10 | 1 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008344 | Biological process | adult locomotory behavior |
GO_0007015 | Biological process | actin filament organization |
GO_0051694 | Biological process | pointed-end actin filament capping |
GO_0006936 | Biological process | muscle contraction |
GO_0070307 | Biological process | lens fiber cell development |
GO_0030239 | Biological process | myofibril assembly |
GO_0030863 | Cellular component | cortical cytoskeleton |
GO_0030016 | Cellular component | myofibril |
GO_0008180 | Cellular component | COP9 signalosome |
GO_0030017 | Cellular component | sarcomere |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005865 | Cellular component | striated muscle thin filament |
GO_0016020 | Cellular component | membrane |
GO_0005884 | Cellular component | actin filament |
GO_0005523 | Molecular function | tropomyosin binding |
GO_0003779 | Molecular function | actin binding |
Gene name | TMOD1 |
Protein name | Tropomodulin-1 (Erythrocyte tropomodulin) (E-Tmod) |
Synonyms | D9S57E TMOD |
Description | FUNCTION: Blocks the elongation and depolymerization of the actin filaments at the pointed end. The Tmod/TM complex contributes to the formation of the short actin protofilament, which in turn defines the geometry of the membrane skeleton. May play an important role in regulating the organization of actin filaments by preferentially binding to a specific tropomyosin isoform at its N-terminus. . |
Accessions | P28289 ENST00000395211.6 [P28289-1] ENST00000259365.9 [P28289-1] ENST00000375175.1 [P28289-2] |