Name | Number of supported studies | Average coverage | |
---|---|---|---|
hepatocyte | 5 studies | 37% ± 22% | |
astrocyte | 4 studies | 25% ± 6% | |
mast cell | 4 studies | 24% ± 11% | |
epithelial cell | 3 studies | 29% ± 9% | |
enterocyte | 3 studies | 32% ± 12% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 19% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1186.93 | 245 / 245 | 98% | 31.70 | 493 / 502 |
liver | 100% | 3134.36 | 226 / 226 | 97% | 25.25 | 393 / 406 |
thymus | 100% | 1023.08 | 653 / 653 | 95% | 8.58 | 576 / 605 |
kidney | 100% | 587.61 | 89 / 89 | 94% | 12.11 | 849 / 901 |
pancreas | 100% | 503.48 | 328 / 328 | 89% | 5.37 | 158 / 178 |
adrenal gland | 100% | 1070.28 | 258 / 258 | 88% | 6.02 | 203 / 230 |
brain | 95% | 325.78 | 2514 / 2642 | 92% | 5.72 | 647 / 705 |
skin | 100% | 409.55 | 1802 / 1809 | 87% | 5.91 | 411 / 472 |
esophagus | 100% | 585.03 | 1444 / 1445 | 70% | 3.53 | 129 / 183 |
lung | 99% | 486.37 | 573 / 578 | 64% | 3.24 | 743 / 1155 |
uterus | 100% | 691.84 | 170 / 170 | 62% | 3.67 | 284 / 459 |
breast | 100% | 778.26 | 459 / 459 | 60% | 2.75 | 676 / 1118 |
stomach | 100% | 734.01 | 359 / 359 | 57% | 2.83 | 163 / 286 |
ovary | 98% | 588.01 | 177 / 180 | 56% | 2.01 | 239 / 430 |
intestine | 100% | 903.19 | 966 / 966 | 49% | 2.34 | 257 / 527 |
bladder | 100% | 622.00 | 21 / 21 | 31% | 1.29 | 155 / 504 |
adipose | 100% | 781.08 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 799.19 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 11.34 | 80 / 80 |
spleen | 100% | 536.74 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 98% | 362.53 | 789 / 803 | 0% | 0 | 0 / 0 |
heart | 92% | 261.39 | 789 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 73% | 3.08 | 33 / 45 |
lymph node | 0% | 0 | 0 / 0 | 41% | 1.24 | 12 / 29 |
peripheral blood | 24% | 40.24 | 221 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | TMEM220 |
Protein name | Transmembrane protein 220 |
Synonyms | hCG_1648253 LOC388335 |
Description | |
Accessions | J3KSZ3 ENST00000578345.1 ENST00000580787.5 Q6QAJ8 ENST00000581949.1 J3KSH5 ENST00000341871.8 [Q6QAJ8-1] J3QRF6 ENST00000455996.6 [Q6QAJ8-2] |