Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 32% ± 12% | |
fibroblast | 4 studies | 23% ± 6% | |
hematopoietic precursor cell | 3 studies | 21% ± 4% | |
myofibroblast cell | 3 studies | 19% ± 4% | |
endothelial cell | 3 studies | 25% ± 4% | |
ciliated cell | 3 studies | 23% ± 3% | |
glutamatergic neuron | 3 studies | 23% ± 3% | |
dendritic cell | 3 studies | 28% ± 5% | |
intestinal crypt stem cell | 3 studies | 18% ± 1% | |
basal cell | 3 studies | 26% ± 9% | |
plasmacytoid dendritic cell | 3 studies | 23% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 27% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 902.53 | 459 / 459 | 100% | 25.40 | 1118 / 1118 |
esophagus | 100% | 674.26 | 1445 / 1445 | 100% | 16.16 | 183 / 183 |
ovary | 100% | 873.14 | 180 / 180 | 100% | 14.95 | 430 / 430 |
stomach | 100% | 590.96 | 359 / 359 | 100% | 17.27 | 286 / 286 |
intestine | 100% | 658.25 | 966 / 966 | 100% | 19.78 | 526 / 527 |
bladder | 100% | 730.52 | 21 / 21 | 100% | 19.46 | 503 / 504 |
uterus | 100% | 936.95 | 170 / 170 | 100% | 21.63 | 457 / 459 |
thymus | 100% | 642.29 | 653 / 653 | 100% | 16.05 | 602 / 605 |
prostate | 100% | 639.84 | 244 / 245 | 100% | 17.60 | 501 / 502 |
kidney | 100% | 600.64 | 89 / 89 | 99% | 12.85 | 895 / 901 |
lung | 99% | 593.20 | 574 / 578 | 100% | 18.04 | 1155 / 1155 |
pancreas | 100% | 533.37 | 327 / 328 | 99% | 15.24 | 177 / 178 |
liver | 100% | 416.96 | 226 / 226 | 99% | 9.85 | 400 / 406 |
skin | 100% | 1056.04 | 1809 / 1809 | 98% | 18.04 | 463 / 472 |
adrenal gland | 100% | 692.41 | 258 / 258 | 97% | 10.27 | 224 / 230 |
brain | 97% | 347.67 | 2572 / 2642 | 100% | 13.91 | 705 / 705 |
adipose | 100% | 922.38 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 928.47 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.06 | 29 / 29 |
spleen | 100% | 845.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.58 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.52 | 1 / 1 |
muscle | 99% | 391.75 | 793 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 11.46 | 77 / 80 |
heart | 95% | 409.84 | 822 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 55% | 693.53 | 509 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_1990275 | Molecular function | preribosome binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TMA16 |
Protein name | Translation machinery-associated protein 16 Translation machinery associated 16 homolog |
Synonyms | C4orf43 |
Description | FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit in the nucleus. . FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit in the nucleus. . FUNCTION: Involved in the biogenesis of the 60S ribosomal subunit in the nucleus. . |
Accessions | ENST00000358572.10 Q96EY4 D6RE67 ENST00000508268.1 H0Y9X1 ENST00000513134.5 ENST00000513272.5 ENST00000509657.5 D6RC31 D6RA57 |