Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 7 studies | 37% ± 19% | |
adipocyte | 6 studies | 26% ± 5% | |
glutamatergic neuron | 6 studies | 31% ± 13% | |
pericyte | 6 studies | 33% ± 18% | |
interneuron | 6 studies | 38% ± 24% | |
retina horizontal cell | 5 studies | 54% ± 28% | |
endothelial cell | 4 studies | 30% ± 13% | |
retinal rod cell | 4 studies | 70% ± 27% | |
GABAergic interneuron | 3 studies | 35% ± 14% | |
granule cell | 3 studies | 27% ± 15% | |
microglial cell | 3 studies | 52% ± 20% | |
glycinergic amacrine cell | 3 studies | 40% ± 9% | |
retinal cone cell | 3 studies | 43% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 91% | 126.12 | 81 / 89 | 46% | 1.78 | 417 / 901 |
thymus | 99% | 185.52 | 646 / 653 | 36% | 0.90 | 217 / 605 |
breast | 97% | 232.86 | 443 / 459 | 33% | 0.75 | 367 / 1118 |
prostate | 91% | 125.58 | 223 / 245 | 31% | 0.63 | 158 / 502 |
adipose | 99% | 251.78 | 1192 / 1204 | 0% | 0 | 0 / 0 |
brain | 88% | 88.16 | 2329 / 2642 | 9% | 0.20 | 66 / 705 |
blood vessel | 92% | 256.95 | 1227 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 58% | 43.89 | 839 / 1445 | 20% | 1.27 | 37 / 183 |
ovary | 32% | 21.06 | 57 / 180 | 28% | 0.81 | 121 / 430 |
intestine | 49% | 60.71 | 476 / 966 | 8% | 0.28 | 43 / 527 |
heart | 56% | 43.76 | 478 / 861 | 0% | 0 | 0 / 0 |
bladder | 48% | 26.43 | 10 / 21 | 8% | 0.21 | 38 / 504 |
lung | 32% | 19.43 | 184 / 578 | 23% | 1.00 | 268 / 1155 |
adrenal gland | 8% | 3.59 | 20 / 258 | 41% | 4.79 | 94 / 230 |
pancreas | 2% | 0.80 | 6 / 328 | 46% | 1.08 | 81 / 178 |
uterus | 24% | 17.19 | 40 / 170 | 14% | 0.60 | 63 / 459 |
stomach | 23% | 14.53 | 81 / 359 | 13% | 0.39 | 38 / 286 |
skin | 27% | 19.93 | 481 / 1809 | 2% | 0.18 | 11 / 472 |
tonsil | 0% | 0 | 0 / 0 | 18% | 0.83 | 8 / 45 |
muscle | 14% | 6.75 | 112 / 803 | 0% | 0 | 0 / 0 |
liver | 6% | 2.83 | 13 / 226 | 4% | 0.09 | 16 / 406 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.06 | 1 / 29 |
eye | 0% | 0 | 0 / 0 | 3% | 0.12 | 2 / 80 |
spleen | 1% | 0.27 | 2 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.09 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | THSD7B |
Protein name | THSD7B protein Thrombospondin type-1 domain-containing protein 7B Thrombospondin type 1 domain containing 7B |
Synonyms | KIAA1679 |
Description | |
Accessions | ENST00000472720.5 Q9C0I4 R4GMU2 Q8WUV0 ENST00000409968.6 |