THBS3 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of THBS3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	2403.78	459 / 459	100%	21.91	1116 / 1118
prostate	100%	3017.29	245 / 245	100%	11.31	501 / 502
ovary	100%	3262.39	180 / 180	100%	26.49	428 / 430
pancreas	100%	1434.80	327 / 328	99%	21.34	177 / 178
uterus	100%	4800.33	170 / 170	99%	17.73	454 / 459
thymus	100%	3427.29	653 / 653	99%	10.65	596 / 605
bladder	100%	2529.38	21 / 21	98%	14.22	494 / 504
lung	100%	2227.47	578 / 578	98%	12.94	1130 / 1155
skin	99%	1842.55	1795 / 1809	98%	15.20	461 / 472
esophagus	100%	2674.89	1445 / 1445	96%	9.21	176 / 183
intestine	100%	2752.34	966 / 966	94%	8.40	498 / 527
stomach	100%	1609.12	358 / 359	93%	7.71	265 / 286
adrenal gland	100%	1262.55	257 / 258	92%	12.30	211 / 230
kidney	99%	2045.03	88 / 89	92%	13.76	828 / 901
liver	93%	1008.61	211 / 226	84%	7.42	341 / 406
brain	80%	733.32	2108 / 2642	97%	13.12	687 / 705
adipose	100%	2219.78	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	6.30	29 / 29
spleen	100%	1556.33	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	26.87	1 / 1
blood vessel	100%	3005.39	1333 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	99%	9.73	79 / 80
tonsil	0%	0	0 / 0	98%	6.62	44 / 45
heart	85%	1399.49	730 / 861	0%	0	0 / 0
peripheral blood	78%	810.54	729 / 929	0%	0	0 / 0
muscle	45%	311.74	363 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0060346	Biological process	bone trabecula formation
GO_0003417	Biological process	growth plate cartilage development
GO_0043931	Biological process	ossification involved in bone maturation
GO_0007160	Biological process	cell-matrix adhesion
GO_0005576	Cellular component	extracellular region
GO_0062023	Cellular component	collagen-containing extracellular matrix
GO_0048471	Cellular component	perinuclear region of cytoplasm
GO_0005201	Molecular function	extracellular matrix structural constituent
GO_0008201	Molecular function	heparin binding
GO_0005509	Molecular function	calcium ion binding
GO_0005515	Molecular function	protein binding

Gene name	THBS3
Protein name	Alternative protein THBS3 Thrombospondin 3 (cDNA FLJ59383, highly similar to Thrombospondin-3) Thrombospondin 3 Thrombospondin-3 THBS3 protein (Thrombospondin 3)
Synonyms	TSP3
Description	FUNCTION: Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions. Can bind to fibrinogen, fibronectin, laminin and type V collagen.
Accessions	P49746 ENST00000457183.6 [P49746-2] Q2HIZ0 L8E9H3 Q2HIZ1 B4DQH6 ENST00000428962.2 ENST00000541576.5 ENST00000541990.5 F5H4Z8 ENST00000368378.7 [P49746-1]

THBS3 report