Insufficient scRNA-seq data for expression of TERB1 at single-cell level.
Insufficient scRNA-seq data for expression of TERB1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 95% | 4.62 | 20 / 21 | 1% | 0.01 | 4 / 504 |
thymus | 86% | 6.44 | 563 / 653 | 0% | 0 | 0 / 605 |
skin | 82% | 5.80 | 1478 / 1809 | 0% | 0 | 0 / 472 |
prostate | 81% | 5.34 | 198 / 245 | 0% | 0 | 0 / 502 |
breast | 79% | 5.75 | 362 / 459 | 0% | 0.00 | 1 / 1118 |
adipose | 75% | 4.86 | 907 / 1204 | 0% | 0 | 0 / 0 |
intestine | 72% | 3.72 | 694 / 966 | 1% | 0.01 | 3 / 527 |
brain | 72% | 4.20 | 1903 / 2642 | 0% | 0 | 0 / 705 |
spleen | 71% | 3.58 | 172 / 241 | 0% | 0 | 0 / 0 |
lung | 69% | 3.70 | 399 / 578 | 1% | 0.01 | 6 / 1155 |
kidney | 66% | 3.21 | 59 / 89 | 0% | 0.00 | 2 / 901 |
pancreas | 65% | 2.81 | 214 / 328 | 0% | 0 | 0 / 178 |
uterus | 65% | 3.51 | 110 / 170 | 0% | 0 | 0 / 459 |
esophagus | 61% | 2.66 | 885 / 1445 | 2% | 0.07 | 4 / 183 |
ovary | 62% | 3.19 | 111 / 180 | 1% | 0.01 | 3 / 430 |
blood vessel | 62% | 2.93 | 828 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 59% | 2.40 | 152 / 258 | 0% | 0 | 0 / 230 |
liver | 59% | 2.59 | 133 / 226 | 0% | 0 | 0 / 406 |
stomach | 55% | 2.22 | 198 / 359 | 2% | 0.04 | 7 / 286 |
muscle | 47% | 2.00 | 379 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 30% | 1.32 | 283 / 929 | 0% | 0 | 0 / 0 |
heart | 27% | 0.89 | 236 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0070197 | Biological process | meiotic attachment of telomere to nuclear envelope |
GO_1990918 | Biological process | double-strand break repair involved in meiotic recombination |
GO_0045141 | Biological process | meiotic telomere clustering |
GO_0007129 | Biological process | homologous chromosome pairing at meiosis |
GO_0000781 | Cellular component | chromosome, telomeric region |
GO_0070187 | Cellular component | shelterin complex |
GO_0005637 | Cellular component | nuclear inner membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | TERB1 |
Protein name | Telomere repeats-binding bouquet formation protein 1 (Coiled-coil domain-containing protein 79) Telomere repeat binding bouquet formation protein 1 |
Synonyms | CCDC79 |
Description | FUNCTION: Meiosis-specific telomere-associated protein involved in meiotic telomere attachment to the nucleus inner membrane, a crucial step for homologous pairing and synapsis. Component of the MAJIN-TERB1-TERB2 complex, which promotes telomere cap exchange by mediating attachment of telomeric DNA to the inner nuclear membrane and replacement of the protective cap of telomeric chromosomes: in early meiosis, the MAJIN-TERB1-TERB2 complex associates with telomeric DNA and the shelterin/telosome complex. During prophase, the complex matures and promotes release of the shelterin/telosome complex from telomeric DNA. In the MAJIN-TERB1-TERB2 complex, TERB1 probably mediates association with the shelterin/telosome complex via interaction with TERF1, promoting priming telomeric DNA attachment'. Promotes telomere association with the nuclear envelope and deposition of the SUN-KASH/LINC complex. Also recruits cohesin to telomeres to develop structural rigidity. . |
Accessions | ENST00000559050.1 ENST00000433154.6 [Q8NA31-1] ENST00000559403.1 ENST00000313294.7 [Q8NA31-3] ENST00000673664.1 J3KT78 A0A669KAY0 ENST00000558713.6 [Q8NA31-1] J3KSG9 Q8NA31 |