Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 12 studies | 53% ± 17% | |
adipocyte | 10 studies | 64% ± 13% | |
GABAergic neuron | 9 studies | 60% ± 24% | |
interneuron | 7 studies | 57% ± 20% | |
astrocyte | 7 studies | 44% ± 19% | |
neuron | 5 studies | 32% ± 10% | |
endothelial cell | 4 studies | 38% ± 18% | |
granule cell | 4 studies | 32% ± 8% | |
Mueller cell | 4 studies | 40% ± 7% | |
retinal ganglion cell | 4 studies | 57% ± 19% | |
fibroblast | 4 studies | 34% ± 13% | |
oligodendrocyte | 4 studies | 38% ± 20% | |
GABAergic interneuron | 3 studies | 57% ± 21% | |
glial cell | 3 studies | 39% ± 12% | |
oligodendrocyte precursor cell | 3 studies | 29% ± 16% | |
placental villous trophoblast | 3 studies | 40% ± 28% | |
mesothelial cell | 3 studies | 26% ± 14% | |
GABAergic amacrine cell | 3 studies | 47% ± 14% | |
OFF-bipolar cell | 3 studies | 62% ± 29% | |
ON-bipolar cell | 3 studies | 21% ± 8% | |
glycinergic amacrine cell | 3 studies | 34% ± 12% | |
amacrine cell | 3 studies | 31% ± 14% | |
retinal pigment epithelial cell | 3 studies | 26% ± 10% | |
neural progenitor cell | 3 studies | 50% ± 20% | |
connective tissue cell | 3 studies | 32% ± 13% | |
ependymal cell | 3 studies | 33% ± 18% | |
chondrocyte | 3 studies | 43% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2139.40 | 258 / 258 | 83% | 16.80 | 192 / 230 |
thymus | 99% | 1379.61 | 647 / 653 | 73% | 6.66 | 442 / 605 |
breast | 95% | 1037.52 | 435 / 459 | 63% | 4.56 | 706 / 1118 |
pancreas | 66% | 306.23 | 216 / 328 | 83% | 6.43 | 148 / 178 |
prostate | 95% | 1110.03 | 232 / 245 | 47% | 1.76 | 234 / 502 |
brain | 93% | 1368.01 | 2465 / 2642 | 44% | 3.72 | 308 / 705 |
ovary | 96% | 656.09 | 173 / 180 | 41% | 2.63 | 175 / 430 |
uterus | 96% | 1031.82 | 164 / 170 | 32% | 4.55 | 145 / 459 |
esophagus | 74% | 773.76 | 1074 / 1445 | 50% | 5.19 | 91 / 183 |
bladder | 90% | 524.43 | 19 / 21 | 23% | 1.57 | 114 / 504 |
lung | 62% | 372.71 | 359 / 578 | 37% | 2.35 | 431 / 1155 |
intestine | 79% | 1320.81 | 762 / 966 | 20% | 1.25 | 107 / 527 |
kidney | 61% | 269.62 | 54 / 89 | 38% | 2.59 | 338 / 901 |
adipose | 95% | 1081.54 | 1143 / 1204 | 0% | 0 | 0 / 0 |
muscle | 95% | 586.32 | 760 / 803 | 0% | 0 | 0 / 0 |
spleen | 95% | 854.85 | 228 / 241 | 0% | 0 | 0 / 0 |
skin | 43% | 1315.32 | 777 / 1809 | 50% | 6.28 | 238 / 472 |
stomach | 35% | 276.52 | 126 / 359 | 33% | 2.20 | 93 / 286 |
tonsil | 0% | 0 | 0 / 0 | 60% | 4.85 | 27 / 45 |
heart | 57% | 302.36 | 492 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 42% | 215.30 | 556 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 15% | 1.26 | 12 / 80 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.45 | 3 / 29 |
liver | 4% | 11.91 | 8 / 226 | 3% | 0.27 | 12 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_1903385 | Biological process | regulation of homophilic cell adhesion |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0048666 | Biological process | neuron development |
GO_0007157 | Biological process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0010976 | Biological process | positive regulation of neuron projection development |
GO_0048593 | Biological process | camera-type eye morphogenesis |
GO_0030424 | Cellular component | axon |
GO_0005886 | Cellular component | plasma membrane |
GO_0043005 | Cellular component | neuron projection |
GO_0016020 | Cellular component | membrane |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0042803 | Molecular function | protein homodimerization activity |
Gene name | TENM3 |
Protein name | Teneurin transmembrane protein 3 Teneurin-3 (Ten-3) (Protein Odd Oz/ten-m homolog 3) (Tenascin-M3) (Ten-m3) (Teneurin transmembrane protein 3) |
Synonyms | ODZ3 KIAA1455 TNM3 |
Description | FUNCTION: Involved in neural development by regulating the establishment of proper connectivity within the nervous system. Acts in both pre- and postsynaptic neurons in the hippocampus to control the assembly of a precise topographic projection: required in both CA1 and subicular neurons for the precise targeting of proximal CA1 axons to distal subiculum, probably by promoting homophilic cell adhesion. Required for proper dendrite morphogenesis and axon targeting in the vertebrate visual system, thereby playing a key role in the development of the visual pathway. Regulates the formation in ipsilateral retinal mapping to both the dorsal lateral geniculate nucleus (dLGN) and the superior colliculus (SC). May also be involved in the differentiation of the fibroblast-like cells in the superficial layer of mandibular condylar cartilage into chondrocytes. . |
Accessions | ENST00000512480.5 ENST00000511685.6 H0YAF0 D6RGC5 Q9P273 ENST00000510504.1 |