Name | Number of supported studies | Average coverage | |
---|---|---|---|
smooth muscle cell | 16 studies | 30% ± 16% | |
fibroblast | 8 studies | 29% ± 11% | |
ciliated cell | 8 studies | 29% ± 8% | |
myofibroblast cell | 7 studies | 23% ± 6% | |
pericyte | 7 studies | 21% ± 3% | |
endothelial cell | 7 studies | 26% ± 9% | |
connective tissue cell | 5 studies | 30% ± 10% | |
mast cell | 4 studies | 20% ± 3% | |
pancreatic A cell | 4 studies | 52% ± 15% | |
type B pancreatic cell | 4 studies | 48% ± 20% | |
macrophage | 4 studies | 27% ± 8% | |
astrocyte | 4 studies | 27% ± 15% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 29% ± 2% | |
neuron | 4 studies | 29% ± 11% | |
pancreatic D cell | 3 studies | 60% ± 21% | |
kidney loop of Henle epithelial cell | 3 studies | 23% ± 5% | |
retinal ganglion cell | 3 studies | 66% ± 20% | |
amacrine cell | 3 studies | 49% ± 15% | |
retina horizontal cell | 3 studies | 32% ± 13% | |
Mueller cell | 3 studies | 30% ± 8% | |
abnormal cell | 3 studies | 19% ± 2% | |
GABAergic neuron | 3 studies | 26% ± 3% | |
glutamatergic neuron | 3 studies | 33% ± 11% | |
dendritic cell | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 5239.20 | 2641 / 2642 | 100% | 109.57 | 705 / 705 |
prostate | 100% | 4879.75 | 244 / 245 | 100% | 89.77 | 501 / 502 |
thymus | 100% | 2607.71 | 652 / 653 | 100% | 66.32 | 602 / 605 |
adrenal gland | 100% | 2869.54 | 257 / 258 | 98% | 95.50 | 225 / 230 |
ovary | 100% | 7482.38 | 180 / 180 | 96% | 29.36 | 413 / 430 |
breast | 99% | 2169.11 | 455 / 459 | 96% | 82.42 | 1077 / 1118 |
skin | 98% | 2099.20 | 1764 / 1809 | 94% | 31.85 | 444 / 472 |
kidney | 100% | 1998.06 | 89 / 89 | 91% | 25.33 | 818 / 901 |
lung | 99% | 2294.27 | 572 / 578 | 85% | 22.83 | 982 / 1155 |
uterus | 99% | 7687.71 | 169 / 170 | 84% | 37.27 | 385 / 459 |
bladder | 100% | 6208.24 | 21 / 21 | 74% | 26.72 | 375 / 504 |
pancreas | 67% | 717.76 | 221 / 328 | 96% | 37.73 | 171 / 178 |
esophagus | 87% | 4372.25 | 1256 / 1445 | 60% | 11.61 | 109 / 183 |
stomach | 96% | 2285.31 | 343 / 359 | 43% | 9.04 | 124 / 286 |
intestine | 89% | 2445.21 | 857 / 966 | 35% | 7.66 | 183 / 527 |
blood vessel | 100% | 6593.77 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.00 | 1 / 1 |
spleen | 99% | 2086.50 | 238 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 35.38 | 79 / 80 |
adipose | 97% | 1969.90 | 1169 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 24.66 | 26 / 29 |
heart | 89% | 1663.85 | 763 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 69% | 17.45 | 31 / 45 |
muscle | 26% | 253.75 | 205 / 803 | 0% | 0 | 0 / 0 |
liver | 3% | 27.73 | 6 / 226 | 22% | 5.61 | 88 / 406 |
peripheral blood | 18% | 237.11 | 170 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005634 | Cellular component | nucleus |
Gene name | TCEAL3 |
Protein name | Transcription elongation factor A protein-like 3 (TCEA-like protein 3) (Transcription elongation factor S-II protein-like 3) |
Synonyms | MSTP072 |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000372627.10 ENST00000243286.7 ENST00000372628.5 Q969E4 |