Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 23% ± 6% | |
natural killer cell | 8 studies | 19% ± 3% | |
CD16-positive, CD56-dim natural killer cell, human | 5 studies | 19% ± 3% | |
gamma-delta T cell | 5 studies | 20% ± 7% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 18% ± 3% | |
mature NK T cell | 4 studies | 16% ± 0% | |
epithelial cell | 4 studies | 29% ± 9% | |
glutamatergic neuron | 4 studies | 45% ± 17% | |
neuron | 4 studies | 27% ± 11% | |
GABAergic neuron | 3 studies | 37% ± 8% | |
platelet | 3 studies | 26% ± 3% | |
megakaryocyte | 3 studies | 30% ± 6% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 26% ± 11% | |
erythrocyte | 3 studies | 30% ± 17% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 19% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 34% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 963.85 | 1445 / 1445 | 100% | 8.14 | 183 / 183 |
lung | 100% | 869.02 | 578 / 578 | 100% | 9.66 | 1155 / 1155 |
ovary | 100% | 861.12 | 180 / 180 | 100% | 8.06 | 430 / 430 |
prostate | 100% | 1377.20 | 245 / 245 | 100% | 14.88 | 502 / 502 |
brain | 100% | 1443.42 | 2640 / 2642 | 100% | 11.35 | 704 / 705 |
uterus | 100% | 979.58 | 170 / 170 | 100% | 10.08 | 458 / 459 |
bladder | 100% | 995.81 | 21 / 21 | 99% | 9.01 | 500 / 504 |
breast | 100% | 765.93 | 459 / 459 | 99% | 7.36 | 1108 / 1118 |
thymus | 100% | 832.55 | 653 / 653 | 99% | 6.93 | 599 / 605 |
stomach | 100% | 843.36 | 359 / 359 | 99% | 8.34 | 282 / 286 |
intestine | 100% | 784.07 | 966 / 966 | 98% | 9.40 | 514 / 527 |
adrenal gland | 100% | 564.68 | 258 / 258 | 96% | 7.84 | 220 / 230 |
pancreas | 96% | 383.39 | 316 / 328 | 99% | 7.20 | 176 / 178 |
kidney | 100% | 743.88 | 89 / 89 | 92% | 4.57 | 829 / 901 |
skin | 100% | 870.13 | 1806 / 1809 | 91% | 5.44 | 429 / 472 |
liver | 100% | 497.47 | 225 / 226 | 90% | 4.62 | 367 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.48 | 29 / 29 |
spleen | 100% | 949.66 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.98 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.30 | 1 / 1 |
adipose | 100% | 821.17 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 783.06 | 1328 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 834.50 | 912 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 628.53 | 845 / 861 | 0% | 0 | 0 / 0 |
muscle | 86% | 267.43 | 688 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 59% | 2.03 | 47 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0001675 | Biological process | acrosome assembly |
GO_0007289 | Biological process | spermatid nucleus differentiation |
GO_0006352 | Biological process | DNA-templated transcription initiation |
GO_0006235 | Biological process | dTTP biosynthetic process |
GO_0001673 | Cellular component | male germ cell nucleus |
GO_0005672 | Cellular component | transcription factor TFIIA complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0140223 | Molecular function | general transcription initiation factor activity |
GO_0016251 | Molecular function | RNA polymerase II general transcription initiation factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0000979 | Molecular function | RNA polymerase II core promoter sequence-specific DNA binding |
Gene name | TBPL1 |
Protein name | TATA-box binding protein like 1 TATA box-binding protein-like 1 (TATA box-binding protein-related factor 2) (TBP-like factor) (TBP-related protein) TATA box-binding protein-like 1 (TBP-like 1) (21 kDa TBP-like protein) (Second TBP of unique DNA protein) (STUD) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor) (TBP-related protein) |
Synonyms | TLF TRF2 TRP TLP21 TLP |
Description | FUNCTION: Part of a specialized transcription system that mediates the transcription of most ribosomal proteins through the 5'-TCT-3' motif which is a core promoter element at these genes. Seems to also mediate the transcription of NF1. Does not bind the TATA box. . |
Accessions | ENST00000367871.5 P62380 Q7Z6T9 ENST00000237264.9 ENST00000367869.1 Q7Z6U1 ENST00000416965.5 ENST00000457715.1 Q7Z6U0 ENST00000613034.4 Q7Z6U2 |