Insufficient scRNA-seq data for expression of TARM1 at single-cell level.
Insufficient scRNA-seq data for expression of TARM1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
peripheral blood | 80% | 65.51 | 739 / 929 | 0% | 0 | 0 / 0 |
spleen | 74% | 17.54 | 179 / 241 | 0% | 0 | 0 / 0 |
lung | 42% | 3.68 | 241 / 578 | 0% | 0.01 | 4 / 1155 |
liver | 8% | 0.38 | 17 / 226 | 0% | 0 | 0 / 406 |
adipose | 6% | 0.29 | 71 / 1204 | 0% | 0 | 0 / 0 |
bladder | 5% | 0.90 | 1 / 21 | 0% | 0.18 | 1 / 504 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
blood vessel | 3% | 0.13 | 44 / 1335 | 0% | 0 | 0 / 0 |
prostate | 3% | 0.13 | 8 / 245 | 0% | 0 | 0 / 502 |
stomach | 2% | 0.06 | 6 / 359 | 1% | 0.03 | 4 / 286 |
breast | 3% | 0.10 | 13 / 459 | 0% | 0.00 | 1 / 1118 |
brain | 3% | 0.12 | 72 / 2642 | 0% | 0.00 | 1 / 705 |
thymus | 2% | 0.10 | 16 / 653 | 0% | 0 | 0 / 605 |
esophagus | 2% | 0.07 | 27 / 1445 | 1% | 0.02 | 1 / 183 |
kidney | 2% | 0.08 | 2 / 89 | 0% | 0.00 | 1 / 901 |
uterus | 2% | 0.09 | 4 / 170 | 0% | 0 | 0 / 459 |
heart | 2% | 0.09 | 20 / 861 | 0% | 0 | 0 / 0 |
intestine | 1% | 0.04 | 9 / 966 | 1% | 0.01 | 4 / 527 |
pancreas | 1% | 0.04 | 4 / 328 | 0% | 0 | 0 / 178 |
muscle | 1% | 0.04 | 9 / 803 | 0% | 0 | 0 / 0 |
skin | 1% | 0.03 | 17 / 1809 | 0% | 0 | 0 / 472 |
ovary | 1% | 0.02 | 1 / 180 | 0% | 0.19 | 1 / 430 |
adrenal gland | 0% | 0.01 | 1 / 258 | 0% | 0 | 0 / 230 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0002250 | Biological process | adaptive immune response |
GO_2000515 | Biological process | negative regulation of CD4-positive, alpha-beta T cell activation |
GO_0002764 | Biological process | immune response-regulating signaling pathway |
GO_0045087 | Biological process | innate immune response |
GO_0070821 | Cellular component | tertiary granule membrane |
GO_0035579 | Cellular component | specific granule membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0034987 | Molecular function | immunoglobulin receptor binding |
Gene name | TARM1 |
Protein name | T cell-interacting, activating receptor on myeloid cells 1 T-cell-interacting, activating receptor on myeloid cells protein 1 (OSCAR-like transcript-2 protein) (OLT-2) |
Synonyms | |
Description | FUNCTION: May act as receptor (By similarity). Negatively regulates TCR-mediated CD4(+) T cell proliferation and activation, possibly by binding an unknown ligand on the T cell surface . Enhances Toll-like receptor-mediated production of pro-inflammatory cytokines by macrophages and neutrophils (By similarity). . |
Accessions | ENST00000620398.1 ENST00000615726.1 B6A8C7 A0A087X1Q6 ENST00000616041.4 ENST00000611419.1 ENST00000611088.1 ENST00000612678.1 ENST00000432826.2 [B6A8C7-1] ENST00000620140.4 ENST00000620707.1 ENST00000616041.4 [B6A8C7-2] ENST00000622245.1 ENST00000619320.1 ENST00000614463.1 |