TAF1C | OmnibusX

Name	Number of supported studies	Average coverage
endothelial cell	3 studies	24% ± 5%	Explore
astrocyte	3 studies	18% ± 3%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of TAF1C at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	4858.13	258 / 258	100%	21.03	230 / 230
esophagus	100%	4536.60	1445 / 1445	100%	25.71	183 / 183
skin	100%	4572.50	1809 / 1809	100%	26.94	471 / 472
uterus	100%	7925.40	170 / 170	100%	26.12	458 / 459
intestine	100%	5319.86	966 / 966	100%	19.46	525 / 527
prostate	100%	7799.62	245 / 245	100%	18.42	500 / 502
thymus	100%	7941.30	653 / 653	100%	21.37	602 / 605
pancreas	100%	3420.36	328 / 328	99%	21.88	177 / 178
bladder	100%	5610.43	21 / 21	99%	25.10	501 / 504
lung	100%	6014.76	578 / 578	99%	21.31	1143 / 1155
ovary	100%	9509.26	180 / 180	99%	18.77	425 / 430
stomach	100%	4428.60	359 / 359	99%	18.62	282 / 286
breast	100%	6898.65	459 / 459	99%	17.13	1102 / 1118
kidney	100%	5431.13	89 / 89	98%	21.83	886 / 901
brain	97%	3340.68	2566 / 2642	100%	40.05	705 / 705
liver	100%	2584.35	226 / 226	93%	11.08	378 / 406
adipose	100%	6008.68	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	23.08	29 / 29
spleen	100%	11838.41	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	19.15	45 / 45
ureter	0%	0	0 / 0	100%	25.92	1 / 1
blood vessel	100%	3826.26	1333 / 1335	0%	0	0 / 0
heart	100%	3191.37	857 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	19.69	79 / 80
muscle	97%	2027.32	782 / 803	0%	0	0 / 0
peripheral blood	85%	2007.40	791 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006366	Biological process	transcription by RNA polymerase II
GO_0001188	Biological process	RNA polymerase I preinitiation complex assembly
GO_0006361	Biological process	transcription initiation at RNA polymerase I promoter
GO_0006360	Biological process	transcription by RNA polymerase I
GO_0005730	Cellular component	nucleolus
GO_0005668	Cellular component	RNA polymerase transcription factor SL1 complex
GO_0005654	Cellular component	nucleoplasm
GO_0001650	Cellular component	fibrillar center
GO_0001181	Molecular function	RNA polymerase I general transcription initiation factor activity
GO_0005515	Molecular function	protein binding
GO_0001164	Molecular function	RNA polymerase I core promoter sequence-specific DNA binding

Gene name	TAF1C
Protein name	TATA box-binding protein-associated factor RNA polymerase I subunit C (RNA polymerase I-specific TBP-associated factor 110 kDa) (TAFI110) (TATA box-binding protein-associated factor 1C) (TBP-associated factor 1C) (Transcription initiation factor SL1/TIF-IB subunit C) TATA-box binding protein associated factor, RNA polymerase I subunit C
Synonyms
Description	FUNCTION: Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (pre-initiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1/TIF-IB with the rDNA promoter. SL1/TIF-IB is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB excludes the association of TBP with TFIID subunits. Recruits RNA polymerase I to the rRNA gene promoter via interaction with RRN3. .
Accessions	ENST00000566732.6 [Q15572-6] ENST00000341690.10 [Q15572-2] ENST00000566903.5 H3BUZ7 Q15572 H3BNH3 H3BTQ6 H3BMQ4 H3BR71 ENST00000567759.5 [Q15572-1] H3BQZ8 ENST00000563428.5 H3BQH8 ENST00000570117.5 [Q15572-4] ENST00000541676.5 [Q15572-4] ENST00000569609.5 ENST00000564345.5 ENST00000569505.5 H3BR91 ENST00000564454.1 ENST00000568265.1 ENST00000561955.1

TAF1C report