Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 4 studies | 25% ± 12% | |
astrocyte | 4 studies | 26% ± 5% | |
macrophage | 4 studies | 17% ± 1% | |
oligodendrocyte | 4 studies | 21% ± 4% | |
microglial cell | 3 studies | 21% ± 2% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 4% | |
GABAergic neuron | 3 studies | 36% ± 7% | |
glutamatergic neuron | 3 studies | 43% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 31% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5075.18 | 1445 / 1445 | 100% | 9.15 | 183 / 183 |
prostate | 100% | 7355.65 | 245 / 245 | 100% | 5.23 | 502 / 502 |
skin | 100% | 5223.65 | 1809 / 1809 | 100% | 5.66 | 472 / 472 |
thymus | 100% | 8555.57 | 653 / 653 | 100% | 6.04 | 603 / 605 |
breast | 100% | 5842.18 | 459 / 459 | 100% | 5.43 | 1113 / 1118 |
intestine | 100% | 6181.53 | 966 / 966 | 99% | 4.43 | 524 / 527 |
uterus | 100% | 6898.02 | 170 / 170 | 99% | 4.58 | 455 / 459 |
bladder | 100% | 5433.10 | 21 / 21 | 99% | 4.32 | 499 / 504 |
pancreas | 100% | 3939.91 | 328 / 328 | 99% | 4.79 | 176 / 178 |
ovary | 100% | 7355.76 | 180 / 180 | 99% | 6.24 | 425 / 430 |
lung | 100% | 5633.24 | 578 / 578 | 98% | 5.32 | 1133 / 1155 |
stomach | 100% | 4549.65 | 359 / 359 | 98% | 5.18 | 280 / 286 |
kidney | 100% | 4695.84 | 89 / 89 | 98% | 4.63 | 882 / 901 |
brain | 97% | 3422.85 | 2569 / 2642 | 99% | 5.58 | 700 / 705 |
adrenal gland | 100% | 4769.15 | 258 / 258 | 93% | 2.49 | 214 / 230 |
liver | 100% | 3257.05 | 226 / 226 | 86% | 2.30 | 351 / 406 |
adipose | 100% | 5207.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 6805.07 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.06 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.96 | 1 / 1 |
blood vessel | 100% | 4457.77 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2771.76 | 798 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 4.55 | 79 / 80 |
heart | 98% | 3018.51 | 847 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 4.25 | 28 / 29 |
peripheral blood | 96% | 3103.77 | 889 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1901668 | Biological process | regulation of superoxide dismutase activity |
GO_0042149 | Biological process | cellular response to glucose starvation |
GO_0021540 | Biological process | corpus callosum morphogenesis |
GO_0061462 | Biological process | protein localization to lysosome |
GO_0009791 | Biological process | post-embryonic development |
GO_0043473 | Biological process | pigmentation |
GO_0034198 | Biological process | cellular response to amino acid starvation |
GO_1904262 | Biological process | negative regulation of TORC1 signaling |
GO_0007417 | Biological process | central nervous system development |
GO_0140007 | Cellular component | KICSTOR complex |
GO_1990130 | Cellular component | GATOR1 complex |
GO_0005777 | Cellular component | peroxisome |
GO_0061700 | Cellular component | GATOR2 complex |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | SZT2 |
Protein name | SZT2 subunit of KICSTOR complex KICSTOR complex protein SZT2 (Seizure threshold 2 protein homolog) Protein SZT2 |
Synonyms | C1orf84 KIAA0467 |
Description | FUNCTION: As part of the KICSTOR complex functions in the amino acid-sensing branch of the TORC1 signaling pathway. Recruits, in an amino acid-independent manner, the GATOR1 complex to the lysosomal membranes and allows its interaction with GATOR2 and the RAG GTPases. Functions upstream of the RAG GTPases and is required to negatively regulate mTORC1 signaling in absence of amino acids. In absence of the KICSTOR complex mTORC1 is constitutively localized to the lysosome and activated. The KICSTOR complex is also probably involved in the regulation of mTORC1 by glucose . May play a role in the cellular response to oxidative stress (By similarity). . |
Accessions | ENST00000406439 Q5T011 ENST00000470139.1 ENST00000634258.3 [Q5T011-1] A0A0C4DG05 ENST00000639852.1 ENST00000372450.8 [Q5T011-7] ENST00000562955.2 [Q5T011-5] A0A1W2PQY2 A0A1W2PRY5 |