Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 12 studies | 37% ± 13% | |
astrocyte | 7 studies | 36% ± 16% | |
glutamatergic neuron | 5 studies | 38% ± 13% | |
oligodendrocyte precursor cell | 5 studies | 32% ± 11% | |
granule cell | 3 studies | 31% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 28% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 962.39 | 2642 / 2642 | 87% | 6.55 | 610 / 705 |
adrenal gland | 99% | 330.45 | 255 / 258 | 67% | 7.45 | 155 / 230 |
kidney | 93% | 177.52 | 83 / 89 | 53% | 4.10 | 474 / 901 |
prostate | 76% | 111.24 | 187 / 245 | 47% | 1.30 | 237 / 502 |
liver | 99% | 341.14 | 223 / 226 | 15% | 0.64 | 59 / 406 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.25 | 1 / 1 |
pancreas | 78% | 94.55 | 256 / 328 | 20% | 0.61 | 35 / 178 |
thymus | 84% | 134.31 | 547 / 653 | 13% | 0.32 | 81 / 605 |
breast | 24% | 36.37 | 112 / 459 | 62% | 8.27 | 689 / 1118 |
uterus | 54% | 126.10 | 91 / 170 | 10% | 0.61 | 47 / 459 |
bladder | 38% | 50.38 | 8 / 21 | 8% | 0.23 | 38 / 504 |
stomach | 18% | 17.81 | 64 / 359 | 4% | 0.08 | 11 / 286 |
skin | 13% | 13.35 | 230 / 1809 | 2% | 0.06 | 11 / 472 |
blood vessel | 14% | 26.80 | 181 / 1335 | 0% | 0 | 0 / 0 |
intestine | 10% | 8.55 | 93 / 966 | 2% | 0.05 | 11 / 527 |
lung | 0% | 0 | 0 / 578 | 10% | 0.35 | 115 / 1155 |
ovary | 4% | 4.35 | 8 / 180 | 3% | 0.10 | 13 / 430 |
esophagus | 2% | 1.63 | 27 / 1445 | 2% | 0.12 | 4 / 183 |
eye | 0% | 0 | 0 / 0 | 3% | 0.15 | 2 / 80 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.06 | 1 / 45 |
heart | 1% | 1.07 | 8 / 861 | 0% | 0 | 0 / 0 |
spleen | 1% | 1.01 | 2 / 241 | 0% | 0 | 0 / 0 |
adipose | 0% | 0.29 | 4 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.23 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0017156 | Biological process | calcium-ion regulated exocytosis |
GO_0017158 | Biological process | regulation of calcium ion-dependent exocytosis |
GO_0099502 | Biological process | calcium-dependent activation of synaptic vesicle fusion |
GO_0070382 | Cellular component | exocytic vesicle |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0030669 | Cellular component | clathrin-coated endocytic vesicle membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031045 | Cellular component | dense core granule |
GO_0098686 | Cellular component | hippocampal mossy fiber to CA3 synapse |
GO_0030276 | Molecular function | clathrin binding |
GO_0000149 | Molecular function | SNARE binding |
GO_0005546 | Molecular function | phosphatidylinositol-4,5-bisphosphate binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005544 | Molecular function | calcium-dependent phospholipid binding |
GO_0001786 | Molecular function | phosphatidylserine binding |
GO_0005515 | Molecular function | protein binding |
GO_0042802 | Molecular function | identical protein binding |
Gene name | SYT9 |
Protein name | SYT9 protein Synaptotagmin 9 Synaptotagmin 9 (cDNA FLJ30441 fis, clone BRACE2009188, highly similar to Synaptotagmin-9) Alternative protein SYT9 Synaptotagmin-9 (Synaptotagmin IX) (SytIX) |
Synonyms | |
Description | FUNCTION: May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis. |
Accessions | ENST00000532592.1 B3KNT7 Q86SS6 ENST00000524820.6 L8ECP0 E9PDN4 ENST00000318881.11 Q8NCP8 |