Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal ganglion cell | 5 studies | 54% ± 21% | |
glutamatergic neuron | 4 studies | 25% ± 13% | |
GABAergic neuron | 4 studies | 30% ± 10% | |
interneuron | 3 studies | 30% ± 10% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 17% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 99% | 197.58 | 178 / 180 | 26% | 1.02 | 110 / 430 |
brain | 89% | 1945.13 | 2358 / 2642 | 30% | 1.38 | 211 / 705 |
uterus | 99% | 262.99 | 168 / 170 | 15% | 0.61 | 71 / 459 |
bladder | 100% | 153.05 | 21 / 21 | 7% | 0.18 | 37 / 504 |
intestine | 97% | 144.19 | 941 / 966 | 2% | 0.04 | 13 / 527 |
prostate | 98% | 109.33 | 240 / 245 | 1% | 0.05 | 5 / 502 |
blood vessel | 98% | 190.65 | 1310 / 1335 | 0% | 0 | 0 / 0 |
lung | 67% | 43.35 | 385 / 578 | 30% | 1.31 | 351 / 1155 |
adrenal gland | 39% | 57.72 | 101 / 258 | 58% | 13.53 | 133 / 230 |
spleen | 89% | 67.63 | 214 / 241 | 0% | 0 | 0 / 0 |
breast | 85% | 65.20 | 392 / 459 | 2% | 0.08 | 27 / 1118 |
heart | 87% | 115.70 | 748 / 861 | 0% | 0 | 0 / 0 |
thymus | 78% | 47.77 | 509 / 653 | 9% | 0.23 | 54 / 605 |
stomach | 78% | 76.15 | 279 / 359 | 6% | 0.12 | 17 / 286 |
esophagus | 78% | 93.28 | 1122 / 1445 | 5% | 0.10 | 10 / 183 |
muscle | 77% | 67.40 | 615 / 803 | 0% | 0 | 0 / 0 |
adipose | 77% | 55.91 | 922 / 1204 | 0% | 0 | 0 / 0 |
kidney | 48% | 28.17 | 43 / 89 | 5% | 0.15 | 44 / 901 |
skin | 28% | 14.63 | 505 / 1809 | 1% | 0.03 | 6 / 472 |
liver | 23% | 9.77 | 51 / 226 | 3% | 0.13 | 12 / 406 |
pancreas | 23% | 10.95 | 74 / 328 | 2% | 0.16 | 4 / 178 |
peripheral blood | 24% | 16.57 | 219 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.43 | 1 / 45 |
eye | 0% | 0 | 0 / 0 | 1% | 0.13 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048488 | Biological process | synaptic vesicle endocytosis |
GO_0048791 | Biological process | calcium ion-regulated exocytosis of neurotransmitter |
GO_1903861 | Biological process | positive regulation of dendrite extension |
GO_0030154 | Biological process | cell differentiation |
GO_0070382 | Cellular component | exocytic vesicle |
GO_0030424 | Cellular component | axon |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0042584 | Cellular component | chromaffin granule membrane |
GO_0030669 | Cellular component | clathrin-coated endocytic vesicle membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031045 | Cellular component | dense core granule |
GO_0030276 | Molecular function | clathrin binding |
GO_0000149 | Molecular function | SNARE binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005544 | Molecular function | calcium-dependent phospholipid binding |
GO_0001786 | Molecular function | phosphatidylserine binding |
GO_0005515 | Molecular function | protein binding |
GO_0043533 | Molecular function | inositol 1,3,4,5 tetrakisphosphate binding |
Gene name | SYT2 |
Protein name | Synaptotagmin Synaptotagmin-2 (Synaptotagmin II) (SytII) |
Synonyms | |
Description | FUNCTION: Exhibits calcium-dependent phospholipid and inositol polyphosphate binding properties (By similarity). May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse (By similarity). Plays a role in dendrite formation by melanocytes . . FUNCTION: May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse. It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone. . |
Accessions | A4FU00 ENST00000367267.5 Q8N9I0 ENST00000367268.5 |