SYS1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
B cell	8 studies	18% ± 2%	Explore
plasmacytoid dendritic cell	7 studies	22% ± 4%	Explore
ciliated cell	7 studies	31% ± 11%	Explore
naive B cell	5 studies	18% ± 1%	Explore
CD4-positive, alpha-beta T cell	3 studies	19% ± 3%	Explore
conventional dendritic cell	3 studies	22% ± 6%	Explore
memory B cell	3 studies	18% ± 2%	Explore
epithelial cell	3 studies	39% ± 3%	Explore
natural killer cell	3 studies	18% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	3 studies	19% ± 2%	Explore
lung	3 studies	20% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1758.63	1445 / 1445	100%	14.62	183 / 183
kidney	100%	2068.21	89 / 89	100%	27.46	901 / 901
liver	100%	1617.14	226 / 226	100%	17.87	406 / 406
ovary	100%	2459.32	180 / 180	100%	22.18	430 / 430
pancreas	100%	1229.01	328 / 328	100%	20.69	178 / 178
prostate	100%	1935.02	245 / 245	100%	20.70	502 / 502
skin	100%	1525.90	1809 / 1809	100%	23.49	472 / 472
thymus	100%	2593.55	653 / 653	100%	28.92	605 / 605
lung	100%	2246.63	578 / 578	100%	20.70	1154 / 1155
breast	100%	2187.86	459 / 459	100%	27.04	1117 / 1118
brain	100%	1342.83	2639 / 2642	100%	24.37	705 / 705
uterus	100%	2495.69	170 / 170	100%	19.42	458 / 459
stomach	100%	1802.65	359 / 359	100%	21.13	285 / 286
intestine	100%	2254.88	966 / 966	100%	20.91	525 / 527
adrenal gland	100%	2102.17	258 / 258	100%	19.13	229 / 230
bladder	100%	2189.95	21 / 21	99%	19.73	501 / 504
adipose	100%	2058.36	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1816.85	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	24.39	80 / 80
lymph node	0%	0	0 / 0	100%	32.80	29 / 29
muscle	100%	1536.86	803 / 803	0%	0	0 / 0
spleen	100%	1748.67	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	15.39	45 / 45
ureter	0%	0	0 / 0	100%	9.24	1 / 1
peripheral blood	98%	1395.95	911 / 929	0%	0	0 / 0
heart	98%	1315.29	843 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0